Triangle Kush x Square Wave BX
RSP 12100
Grower: Collin Palmer
General Information
- Accession Date
- September 16, 2021
- Reported Plant Sex
- not reported
- Report Type
- Whole-Genome Sequencing
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
FAD2-2 | c.367G>T | p.Gly123Cys | missense variant | moderate | contig83 | 1803002 | C/A |
|
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.216A>T | p.Lys72Asn | missense variant | moderate | contig121 | 2828872 | A/T |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
PIE1-2 | c.637T>A | p.Ser213Thr | missense variant | moderate | contig1460 | 1194421 | A/T |
Nearest genetic relatives (All Samples)
- 0.075 Electra (RSP11366)
- 0.085 SourD (RSP12092)
- 0.093 Serious Happiness (RSP10763)
- 0.095 Blueberry Cheesecake (RSP10684)
- 0.096 B52 (SRR14708255)
- 0.096 Lift (RSP11378)
- 0.101 Doug s Varin (RSP11243)
- 0.107 Trump x Trump (RSP11466)
- 0.107 Durban Poison 1 (RSP11013)
- 0.120 Pai 60w (RSP11743)
- 0.120 Domnesia (RSP11184)
- 0.121 Northern Light (SRR14708265)
- 0.123 VIR 469 (SRR14708242)
- 0.123 GG 4 (RSP11461)
- 0.125 Alpine Rocket (SRR14708266)
- 0.127 GG4 (RSP12096)
- 0.127 RKM-2018-032 (RSP11124)
- 0.128 R1in136 (SRR14708237)
- 0.128 RKM-2018-021 (RSP11113)
- 0.128 RKM-2018-017 (RSP11109)
Nearest genetic relatives (Base Tree)
- 0.099 Blueberry Cheesecake (RSP10684)
- 0.129 RKM-2018-032 (RSP11124)
- 0.148 The Gift (RSP10988)
- 0.151 Liberty Haze (RSP11000)
- 0.181 Durban Poison (RSP11014)
- 0.203 RKM-2018-020 (RSP11112)
- 0.204 Hermaphrodite Research Sample1 (RSP11049)
- 0.210 RKM-2018-034 (RSP11126)
- 0.211 Gold Cracker (RSP11048)
- 0.212 RKM-2018-005 (RSP11096)
- 0.212 RKM-2018-033 (RSP11125)
- 0.218 Kimbo Slice (RSP10997)
- 0.222 Pie Hoe (RSP11073)
- 0.225 RKM-2018-029 (RSP11121)
- 0.233 QUEEN JESUS (RSP10105)
- 0.233 RKM-2018-027 (RSP11119)
- 0.237 Golden Goat 2 (RSP10991)
- 0.238 Blueberry Cheesecake (RSP10680)
- 0.240 UP Sunrise (RSP10989)
- 0.245 RKM-2018-003 (RSP11094)
Most genetically distant strains (All Samples)
- 0.452 80E (RSP11213)
- 0.424 80E (RSP11211)
- 0.414 80E (RSP11212)
- 0.402 JL yellow (RSP11075)
- 0.382 Feral (RSP10891)
- 0.380 Unknown- Cherry Wine - 001 (RSP11268)
- 0.380 JL 3rd Gen Mother (RSP11214)
- 0.379 JL 3rd Gen Father (RSP11196)
- 0.378 Tiger Tail 30 (RSP11484)
- 0.369 Northern Lights (RSP11501)
- 0.368 Feral (RSP11206)
- 0.368 Tanao Sri-white 80 (RSP11621)
- 0.368 Feral (RSP10890)
- 0.367 White Label 1 (RSP11336)
- 0.361 Monoica (RSP10241)
- 0.360 Tanao Sri 46 (RSP11486)
- 0.360 Feral (RSP11205)
- 0.358 Santhica27 (RSP11046)
- 0.357 JL 4th Gen 6 (RSP11200)
- 0.356 JL 3rd Gen Mother (RSP11197)
Most genetically distant strains (Base Tree)
- 0.404 JL yellow (RSP11075)
- 0.377 Monoica (RSP10241)
- 0.373 Feral (RSP10890)
- 0.367 Ivory (RSP10668)
- 0.363 Carmagnola (RSP11037)
- 0.358 Lovrin (RSP10658)
- 0.352 Cbot-2019-005 (RSP11133)
- 0.347 Santhica27 (RSP11047)
- 0.343 Futura 75 (RSP10664)
- 0.341 Carmagnola (RSP10979)
- 0.333 Tisza (RSP10659)
- 0.329 USO 31 (RSP10981)
- 0.328 Cherry (RSP11142)
- 0.324 Kyrgyz Gold (RSP11054)
- 0.324 RKM-2018-022 (RSP11114)
- 0.321 Fedora 17 (RSP10661)
- 0.321 Tisza (RSP11044)
- 0.318 Kush Hemp E1 (RSP11128)
- 0.317 RKM-2018-019 (RSP11111)
- 0.313 Black Beauty (RSP11035)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 27
- Concordance:
- 24
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 5
- Concordance:
- 5
Blockchain Registration Information
- Transaction ID
-
ba72032f9e47998c
597712b2b45395b2 6795b649498a6c9b 66efa6bd369dcd77 - SHASUM Hash
-
55d4f6d4bd1dd653
9b911ea5d1eccf84 305eb90b109e5e55 95958acdfda292fd