Juicy Gummy x Royal Kush

RSP 12484

Grower: Garden Remedies

General Information

Sample Name
Juicy Gummy x Royal Kush #7
Accession Date
November 18, 2021
Reported Plant Sex
Male

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Common
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type I

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 1.59%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0642
male female RSP12484

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

No variants to report

Variants (Select Genes of Interest)

DXR-2

UniProt

c.431C>G p.Ala144Gly missense variant moderate contig380 287760

IGV: Start, Jump

G/C
NGS:
0.182
C90:
0.550
ELF3

UniProt

c.1466G>A p.Ser489Asn missense variant moderate contig97 244297

IGV: Start, Jump

G/A
NGS:
0.123
C90:
0.000
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748

IGV: Start, Jump

CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000
EMF2

UniProt

c.1772A>G p.Gln591Arg missense variant moderate contig954 3059929

IGV: Start, Jump

A/G
NGS:
0.092
C90:
0.876
AAE1-3

UniProt

c.188A>G p.Asn63Ser missense variant moderate contig976 1083887

IGV: Start, Jump

T/C
NGS:
0.077
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.033 0.067 0.100 0.133
clone distance sibling distance more distant
  1. 0.029 Rest (RSP11377)
  2. 0.029 Sour D (RSP11343)
  3. 0.033 VIR 469 (SRR14708242)
  4. 0.035 Doug s Varin (RSP11243)
  5. 0.037 Serious Happiness (RSP10763)
  6. 0.038 Blue Dream (RSP11010)
  7. 0.043 East Coast Sour Diesel (RSP10243)
  8. 0.048 SourD (RSP12092)
  9. 0.048 Alpine Rocket (SRR14708266)
  10. 0.050 Blue Dream (RSP11009)
  11. 0.050 JL 4th Gen 7 (RSP11153)
  12. 0.050 B52 (SRR14708255)
  13. 0.054 Electra (RSP11366)
  14. 0.056 UnObtanium (RSP11611)
  15. 0.056 Cream Sugar (RSP12487)
  16. 0.056 Northern Light (SRR14708265)
  17. 0.058 Blue Dream (RSP11004)
  18. 0.058 Super Blue Dream (RSP11011)
  19. 0.058 JL Cross 5 (RSP11506)
  20. 0.058 Badger (RSP11614)

Nearest genetic relatives (Base Tree)

0 0.042 0.083 0.125 0.167
clone distance sibling distance more distant
  1. 0.047 Blueberry Cheesecake (RSP10684)
  2. 0.082 Hermaphrodite Research Sample1 (RSP11049)
  3. 0.094 Liberty Haze (RSP11000)
  4. 0.100 Pie Hoe (RSP11073)
  5. 0.105 Gold Cracker (RSP11048)
  6. 0.112 QUEEN JESUS (RSP10105)
  7. 0.115 Blue Dream (RSP11033)
  8. 0.118 UP Sunrise (RSP10989)
  9. 0.119 Blueberry Cheesecake (RSP10680)
  10. 0.121 The Gift (RSP10988)
  11. 0.131 Recon (RSP10755)
  12. 0.133 Golden Goat 2 (RSP10991)
  13. 0.135 RKM-2018-019 (RSP11111)
  14. 0.146 RKM-2018-005 (RSP11096)
  15. 0.147 RKM-2018-034 (RSP11126)
  16. 0.154 Hermaphrodite ResearchSample2 (RSP11050)
  17. 0.157 RKM-2018-023 (RSP11115)
  18. 0.160 RKM-2018-032 (RSP11124)
  19. 0.162 Skunk 18 (RSP11038)
  20. 0.163 Skywalker OG (RSP10837)

Most genetically distant strains (All Samples)

0 0.100 0.200 0.300 0.400
clone distance sibling distance more distant
  1. 0.369 Carmaleonte (RSP11207)
  2. 0.351 JL 4th Gen 6 (RSP11200)
  3. 0.333 JL 4th Gen 5 (RSP11199)
  4. 0.330 USO31 (RSP10233)
  5. 0.319 Eletta Campana (RSP11209)
  6. 0.319 JL 3rd Gen Father (RSP11196)
  7. 0.318 80E (RSP11212)
  8. 0.318 JL 4th Gen 1 (RSP11193)
  9. 0.305 Carmagnola USO 31 (RSP11204)
  10. 0.304 Feral (RSP11206)
  11. 0.303 Carmagnola (RSP11202)
  12. 0.303 JL 4th Gen 2 (RSP11194)
  13. 0.302 80E (RSP11211)
  14. 0.300 Fedora 17 (RSP11203)
  15. 0.298 Feral (RSP10891)
  16. 0.295 JL 4th Gen 3 (RSP11195)
  17. 0.291 Tiborszallasie (RSP11210)
  18. 0.289 80E (RSP11213)
  19. 0.283 Ivory (RSP10668)
  20. 0.283 IUP3 (SRR14708256)

Most genetically distant strains (Base Tree)

0 0.083 0.167 0.250 0.333
clone distance sibling distance more distant
  1. 0.308 Kyrgyz Gold (RSP11054)
  2. 0.293 JL yellow (RSP11075)
  3. 0.284 Feral (RSP10890)
  4. 0.282 Lovrin (RSP10658)
  5. 0.278 Fedora 17 (RSP10661)
  6. 0.267 Ivory (RSP10668)
  7. 0.262 Carmagnola (RSP10979)
  8. 0.260 Monoica (RSP10241)
  9. 0.256 Kush Hemp E1 (RSP11128)
  10. 0.256 Tisza (RSP11044)
  11. 0.255 Black Beauty (RSP11035)
  12. 0.250 Cherry (RSP11142)
  13. 0.250 Futura 75 (RSP10664)
  14. 0.240 Carmagnola (RSP11037)
  15. 0.234 Jiangji (RSP10653)
  16. 0.229 Cbot-2019-005 (RSP11133)
  17. 0.228 Santhica27 (RSP11047)
  18. 0.222 USO 31 (RSP10981)
  19. 0.222 KYRG-11 (RSP11051)
  20. 0.221 Cbot-2019-004 (RSP11132)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR4448214
Overlapping SNPs:
4
Concordance:
4

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495158
Overlapping SNPs:
1
Concordance:
1

Blockchain Registration Information

Transaction ID
63c76903804f8c1e0d405b3c1ea9c506cdc01d4720f95f23512ec042c021827d
Stamping Certificate
Download PDF (39.7 KB)
SHASUM Hash
6f3e30b36babc2c06bb944664b908e8335178e0d4cf2e32ac24d10eb53af74dc
QR code for RSP12484

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