Camel Toes
RSP 12505
Grower: Seattle Chronic Seeds
General Information
- Sample Name
- CT48
- Accession Date
- December 8, 2021
- Reported Plant Sex
- Male
- Report Type
- Whole-Genome Sequencing
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
PHL-2 | c.932T>C | p.Leu311Pro | missense variant | moderate | contig2621 | 340210 | T/C | |
PHL-2 | c.1057A>G | p.Arg353Gly | missense variant | moderate | contig2621 | 340335 | A/G | |
PHL-2 | c.1096G>A | p.Ala366Thr | missense variant | moderate | contig2621 | 340374 | G/A | |
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2624C>T | p.Ser875Phe | missense variant | moderate | contig2621 | 342667 | C/T | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.2830A>C | p.Asn944His | missense variant | moderate | contig2621 | 342873 | A/C |
|
PHL-2 | c.2933G>T | p.Arg978Leu | missense variant | moderate | contig2621 | 342976 | G/T | |
PHL-2 | c.2936T>G | p.Val979Gly | missense variant | moderate | contig2621 | 342979 | T/G |
|
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.64G>T | p.Ala22Ser | missense variant | moderate | contig83 | 1803305 | C/A |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
aPT1 | c.864C>G | p.Asn288Lys | missense variant | moderate | contig121 | 2842407 | C/G | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
AAE1-2 | c.1118C>G | p.Thr373Ser | missense variant | moderate | contig81 | 210080 | C/G |
|
AAE1-2 | c.1415G>A | p.Ser472Asn | missense variant | moderate | contig81 | 210377 | G/A |
|
AAE1-2 | c.1434G>T | p.Glu478Asp | missense variant | moderate | contig81 | 210396 | G/T |
|
AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
Edestin | c.16T>C | p.Ser6Pro | missense variant | moderate | contig850 | 3065274 | A/G |
|
FAD4 | c.121G>T | p.Val41Phe | missense variant | moderate | contig784 | 1690873 | G/T |
|
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.1088delG | p.Gly363fs | frameshift variant | high | contig1891 | 887051 | AC/A |
|
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
PIE1-2 | c.5932A>G | p.Ile1978Val | missense variant | moderate | contig1460 | 1185552 | T/C | |
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FT |
c.29_43dupAT |
p.Asn10_Asn1 |
disruptive inframe insertion | moderate | contig1561 | 3124441 |
T/TTAATAATAA |
|
FT | c.240C>G | p.Asn80Lys | missense variant | moderate | contig1561 | 3124664 | C/G |
|
FLD | c.2981T>C | p.Met994Thr | missense variant | moderate | contig1450 | 2044012 | A/G | |
FLD | c.125G>A | p.Ser42Asn | missense variant | moderate | contig1450 | 2047909 | C/T | |
PIE1-1 | c.1758T>G | p.Asn586Lys | missense variant | moderate | contig1225 | 2282186 | T/G | |
GGR | c.212G>T | p.Cys71Phe | missense variant | moderate | contig2282 | 549204 | G/T | |
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 |
c.1850_1852d |
p.Met617dup | disruptive inframe insertion | moderate | contig93 | 3339945 | A/AGAT |
|
PKSB-3 | c.1901C>G | p.Ala634Gly | missense variant | moderate | contig93 | 3340008 | C/G |
|
Nearest genetic relatives (All Samples)
- 0.007 Pam1 x Dosidos 18 (RSP12502)
- 0.053 Cream Sugar (RSP12487)
- 0.071 Cherry Lime Runtz (RSP12486)
- 0.090 Pie Scream (RSP12482)
- 0.093 Peach Cresendo (RSP12483)
- 0.118 Juicy Gummy x Royal Kush (RSP12484)
- 0.119 Triangle Kush x Square Wave BX (RSP12100)
- 0.125 SSCBDF7 (RSP12504)
- 0.128 B52 (SRR14708255)
- 0.138 PCL1 (SRR14708246)
- 0.142 Doug s Varin (RSP11243)
- 0.143 VIR 483 (SRR14708238)
- 0.145 Blueberry Cheesecake (RSP10684)
- 0.148 Electra (RSP11366)
- 0.149 Serious Happiness (RSP10763)
- 0.160 Lift (RSP11378)
- 0.163 IUL3 (SRR14708252)
- 0.164 VIR 449 - Szegedi 9 (SRR14708213)
- 0.167 Kompolti (SRR14708277)
- 0.170 IBR1 (SRR14708251)
Nearest genetic relatives (Base Tree)
- 0.180 Blueberry Cheesecake (RSP10684)
- 0.196 Liberty Haze (RSP11000)
- 0.219 Kimbo Slice (RSP10997)
- 0.221 Durban Poison (RSP11014)
- 0.232 Pie Hoe (RSP11073)
- 0.234 The Gift (RSP10988)
- 0.239 UP Sunrise (RSP10989)
- 0.252 Tisza (RSP10659)
- 0.256 QUEEN JESUS (RSP10105)
- 0.257 Jiangji (RSP10653)
- 0.259 Gold Cracker (RSP11048)
- 0.259 RKM-2018-020 (RSP11112)
- 0.262 Skywalker OG (RSP10837)
- 0.263 Cherry (RSP11143)
- 0.267 Golden Goat 2 (RSP10991)
- 0.268 CST (RSP11002)
- 0.268 Recon (RSP10755)
- 0.269 Tygra (RSP10667)
- 0.269 KYRG-11 (RSP11051)
- 0.269 RKM-2018-034 (RSP11126)
Most genetically distant strains (All Samples)
- 0.386 JL 3rd Gen Father (RSP11196)
- 0.377 Kush Hemp E1 (RSP11128)
- 0.376 GMO x Garlic Breath (RSP12507)
- 0.373 Cherry (RSP11142)
- 0.373 Cbot-2019-005 (RSP11133)
- 0.365 White Label 1 (RSP11336)
- 0.363 JL 4th Gen 2 (RSP11194)
- 0.362 Feral (RSP11206)
- 0.362 JL 4th Gen 5 (RSP11199)
- 0.360 80E (RSP11213)
- 0.357 JL yellow (RSP11075)
- 0.355 Northern Lights (RSP11501)
- 0.353 Cherry Blossom (RSP11328)
- 0.349 Danny Noonan (RSP11070)
- 0.348 Chem 91 (RSP11185)
- 0.341 Northern Skunk (RSP11456)
- 0.340 JL 4th Gen 4 (RSP11198)
- 0.339 80E (RSP11211)
- 0.338 IUP3 (SRR14708256)
- 0.338 Feral (RSP10892)
Most genetically distant strains (Base Tree)
- 0.388 Kush Hemp E1 (RSP11128)
- 0.365 Cbot-2019-005 (RSP11133)
- 0.365 Monoica (RSP10241)
- 0.365 JL yellow (RSP11075)
- 0.363 Cherry (RSP11142)
- 0.348 RKM-2018-002 (RSP11093)
- 0.346 Cbot-2019-004 (RSP11132)
- 0.328 Feral (RSP10890)
- 0.325 Skunk 18 (RSP11038)
- 0.321 RKM-2018-028 (RSP11120)
- 0.321 RKM-2018-026 (RSP11118)
- 0.321 Carmagnola (RSP11037)
- 0.320 Italian Kiss (RSP11034)
- 0.320 Carmagnola (RSP10979)
- 0.318 RKM-2018-033 (RSP11125)
- 0.318 USO 31 (RSP10981)
- 0.316 Ivory (RSP10668)
- 0.315 Lovrin (RSP10658)
- 0.315 Black Beauty (RSP11035)
- 0.313 RKM-2018-019 (RSP11111)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 14
- Concordance:
- 11
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 2
- Concordance:
- 2
Blockchain Registration Information
- Transaction ID
-
620eabdcdf10f608
877d8181d3151984 d325946626a7271c fe285da7d4c79abc - Stamping Certificate
- Download PDF (39.7 KB)
- SHASUM Hash
-
f867045bdd5ca312
ce25164555d5c49f 7aadaec04a1e951f 8b90c30f8a4bdc5c