Goin' Bananas
RSP 12509
Grower: Seattle Chronic Seeds
General Information
- Sample Name
- GB141
- Accession Date
- December 8, 2021
- Reported Plant Sex
- Male
- Report Type
- Whole-Genome Sequencing
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PHL-2 |
c.3556_3557d |
p.Lys1186fs | frameshift variant | high | contig2621 | 343598 | GAA/G | |
PKSG-4a | c.37C>G | p.Gln13Glu | missense variant | moderate | contig700 | 1936734 | C/G |
|
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-2b | c.-2_1dupATA | start lost & conservative inframe insertion | high | contig700 | 1951880 | A/ATAT |
|
|
PKSG-4b | c.496A>G | p.Lys166Glu | missense variant | moderate | contig700 | 2721177 | T/C | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.485A>G | p.Lys162Arg | missense variant | moderate | contig700 | 2721188 | T/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b | c.419A>G | p.Asp140Gly | missense variant | moderate | contig700 | 2721254 | T/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
PKSG-4b | c.316+2T>A | splice donor variant & intron variant | high | contig700 | 2723818 | A/T | ||
PKSG-4b | c.238T>C | p.Phe80Leu | missense variant | moderate | contig700 | 2724197 | A/G |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.196T>C | p.Phe66Leu | missense variant | moderate | contig83 | 1803173 | A/G |
|
FAD2-2 | c.172G>T | p.Asp58Tyr | missense variant | moderate | contig83 | 1803197 | C/A |
|
FAD2-2 | c.164A>G | p.His55Arg | missense variant | moderate | contig83 | 1803205 | T/C |
|
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.574A>G | p.Asn192Asp | missense variant | moderate | contig97 | 242280 | A/G | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT4 | c.16G>A | p.Val6Ile | missense variant | moderate | contig121 | 2828672 | G/A |
|
aPT4 | c.97T>C | p.Tyr33His | missense variant | moderate | contig121 | 2828753 | T/C |
|
aPT4 | c.153A>C | p.Lys51Asn | missense variant | moderate | contig121 | 2828809 | A/C |
|
aPT4 | c.198A>C | p.Lys66Asn | missense variant | moderate | contig121 | 2828854 | A/C |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT4 | c.302A>G | p.Asn101Ser | missense variant | moderate | contig121 | 2829099 | A/G |
|
aPT1 | c.629C>T | p.Thr210Ile | missense variant | moderate | contig121 | 2840237 | C/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
AAE1-2 |
c.948_949ins |
p.Asp317fs | frameshift variant | high | contig81 | 209910 | C/CA |
|
AAE1-2 | c.952delC | p.Gln318fs | frameshift variant | high | contig81 | 209912 | AC/A |
|
AAE1-2 | c.953A>G | p.Gln318Arg | missense variant | moderate | contig81 | 209915 | A/G |
|
AAE1-2 | c.955C>T | p.Arg319Cys | missense variant | moderate | contig81 | 209917 | C/T |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
AAE1-2 | c.1118C>G | p.Thr373Ser | missense variant | moderate | contig81 | 210080 | C/G |
|
AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
Edestin | c.17C>T | p.Ser6Leu | missense variant | moderate | contig850 | 3065273 | G/A |
|
Edestin | c.16T>C | p.Ser6Pro | missense variant | moderate | contig850 | 3065274 | A/G |
|
TFL1 | c.302-1G>A | splice acceptor variant & intron variant | high | contig1636 | 520616 | C/T | ||
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.136G>A | p.Val46Ile | missense variant | moderate | contig1891 | 889256 | C/T | |
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
FAD2 |
c.968_969del |
p.Thr323fs | frameshift variant | high | contig1460 | 1083290 | TTG/T |
|
PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
EMF2 |
c.1415_1416i |
p.His474fs | frameshift variant | high | contig954 | 3056602 | A/ATT |
|
EMF2 |
c.1418_1419i |
p.Ser473_His |
disruptive inframe insertion | moderate | contig954 | 3056605 | C/CACA | |
EMF2 |
c.1419_1420i |
p.His474fs | frameshift variant | high | contig954 | 3056606 | G/GT |
|
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FLD | c.2686G>A | p.Ala896Thr | missense variant | moderate | contig1450 | 2044848 | C/T | |
AAE1-3 | c.722G>A | p.Arg241Lys | missense variant | moderate | contig976 | 1083132 | C/T |
|
AAE1-3 | c.659G>A | p.Arg220Gln | missense variant | moderate | contig976 | 1083195 | C/T |
|
AAE1-3 | c.634G>C | p.Gly212Arg | missense variant | moderate | contig976 | 1083220 | C/G |
|
AAE1-3 | c.199A>G | p.Asn67Asp | missense variant | moderate | contig976 | 1083876 | T/C |
|
AAE1-3 | c.188A>G | p.Asn63Ser | missense variant | moderate | contig976 | 1083887 | T/C |
|
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 | c.1652A>G | p.Glu551Gly | missense variant | moderate | contig93 | 3339759 | A/G |
|
PKSB-3 | c.1901C>G | p.Ala634Gly | missense variant | moderate | contig93 | 3340008 | C/G |
|
Nearest genetic relatives (All Samples)
- 0.065 Cream Sugar (RSP12487)
- 0.125 Juicy Gummy x Royal Kush (RSP12484)
- 0.127 B52 (SRR14708255)
- 0.144 Peach Cresendo (RSP12483)
- 0.144 Serious Happiness (RSP10763)
- 0.149 VIR 493 - Glukhovskaja 10 Zheltostebel'naja (SRR14708230)
- 0.150 Alpine Rocket (SRR14708266)
- 0.158 Doug s Varin (RSP11243)
- 0.163 CBG- 40 (RSP11444)
- 0.163 PCL1 (SRR14708246)
- 0.164 Pie Scream (RSP12482)
- 0.165 Whitey (RSP11363)
- 0.172 UnObtanium (RSP11611)
- 0.174 Hindu Kush (SRR14708261)
- 0.176 Cherry Lime Runtz (RSP12486)
- 0.181 Electra (RSP11366)
- 0.181 SourD (RSP12092)
- 0.183 VIR 469 (SRR14708243)
- 0.184 JL X NSPM1 14 (RSP11473)
- 0.185 PP9 (SRR14708260)
Nearest genetic relatives (Base Tree)
- 0.230 UP Sunrise (RSP10989)
- 0.232 The Gift (RSP10988)
- 0.235 Blueberry Cheesecake (RSP10684)
- 0.239 Durban Poison (RSP11014)
- 0.251 RKM-2018-034 (RSP11126)
- 0.259 Liberty Haze (RSP11000)
- 0.261 RKM-2018-020 (RSP11112)
- 0.261 RKM-2018-032 (RSP11124)
- 0.261 Golden Goat 2 (RSP10991)
- 0.264 Recon (RSP10755)
- 0.267 Gold Cracker (RSP11048)
- 0.268 Hermaphrodite Research Sample1 (RSP11049)
- 0.269 RKM-2018-009 (RSP11100)
- 0.274 Blue Dream (RSP11033)
- 0.280 RKM-2018-033 (RSP11125)
- 0.287 RKM-2018-027 (RSP11119)
- 0.288 QUEEN JESUS (RSP10105)
- 0.288 Skywalker OG (RSP10837)
- 0.288 Pie Hoe (RSP11073)
- 0.291 RKM-2018-022 (RSP11114)
Most genetically distant strains (All Samples)
- 0.446 JL yellow (RSP11075)
- 0.441 JL 4th Gen 5 (RSP11199)
- 0.440 Cherry Blossom (RSP11323)
- 0.434 Tanao Sri 46 (RSP11486)
- 0.424 Tanao Sri-white 80 (RSP11621)
- 0.419 JL 4th Gen 2 (RSP11194)
- 0.419 80E (RSP11213)
- 0.409 JL 3rd Gen Father (RSP11196)
- 0.409 80E (RSP11211)
- 0.409 Chematonic Cannatonic x Chemdawg (RSP11394)
- 0.406 Carmagnola (RSP11202)
- 0.404 JL 2 (RSP11076)
- 0.402 Cherry Blossom (RSP11328)
- 0.401 Carmagnola (RSP10655)
- 0.401 Monoica (RSP10241)
- 0.399 Tisza (RSP11045)
- 0.399 Danny Noonan (RSP11070)
- 0.397 JL 3rd Gen Mother (RSP11214)
- 0.394 JL 4th Gen 6 (RSP11200)
- 0.392 JL 3rd Gen Mother (RSP11197)
Most genetically distant strains (Base Tree)
- 0.432 JL yellow (RSP11075)
- 0.411 Monoica (RSP10241)
- 0.400 Feral (RSP10890)
- 0.394 Tisza (RSP11044)
- 0.393 Kyrgyz Gold (RSP11054)
- 0.392 Carmagnola (RSP10979)
- 0.381 Santhica27 (RSP11047)
- 0.381 Cbot-2019-005 (RSP11133)
- 0.379 KYRG-11 (RSP11051)
- 0.371 Ivory (RSP10668)
- 0.371 Fedora 17 (RSP10661)
- 0.369 Futura 75 (RSP10664)
- 0.367 Carmagnola (RSP11037)
- 0.360 Black Beauty (RSP11035)
- 0.359 Jiangji (RSP10653)
- 0.358 Tisza (RSP10659)
- 0.355 Lovrin (RSP10658)
- 0.345 Cherry (RSP11142)
- 0.345 Cherry (RSP11143)
- 0.343 USO 31 (RSP10981)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 32
- Concordance:
- 20
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 6
- Concordance:
- 6
Blockchain Registration Information
- Transaction ID
-
fd59cd21ea361e23
4d7421627efc56fa 932aa8e87d7e25c6 d88d329b194a78bc - Stamping Certificate
- Download PDF (39.8 KB)
- SHASUM Hash
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06e92fae16bef09f
ed9b6580b1cebfb3 13780c46438478d5 1bf1cad7141f62a5