Bucolic Male
RSP 12734
Grower: Sunset Jerry Bucolic Farms
General Information
- Sample Name
- Alien x BC Volunteer
- Accession Date
- September 8, 2022
- Reported Plant Sex
- Male
- Report Type
- Whole-Genome Sequencing
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
GPPs1 |
c.845_848del |
p.Glu282fs | frameshift variant | high | contig676 | 169629 | TGAAA/T |
|
EMF1-2 |
c.2093_2100d |
p.Gly698fs | frameshift variant | high | contig885 | 2970 | TGGATGCAG/T |
|
EMF1-2 | c.2256A>T | p.Lys752Asn | missense variant | moderate | contig885 | 3142 | A/T |
|
PHL-2 | c.44G>A | p.Arg15Lys | missense variant | moderate | contig2621 | 337613 | G/A | |
PHL-2 | c.932T>C | p.Leu311Pro | missense variant | moderate | contig2621 | 340210 | T/C | |
PHL-2 | c.1057A>G | p.Arg353Gly | missense variant | moderate | contig2621 | 340335 | A/G | |
PHL-2 | c.1096G>A | p.Ala366Thr | missense variant | moderate | contig2621 | 340374 | G/A | |
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2624C>T | p.Ser875Phe | missense variant | moderate | contig2621 | 342667 | C/T | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.2830A>C | p.Asn944His | missense variant | moderate | contig2621 | 342873 | A/C |
|
PHL-2 | c.2933G>T | p.Arg978Leu | missense variant | moderate | contig2621 | 342976 | G/T | |
PHL-2 | c.2936T>G | p.Val979Gly | missense variant | moderate | contig2621 | 342979 | T/G |
|
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3379C>G | p.His1127Asp | missense variant | moderate | contig2621 | 343422 | C/G |
|
PHL-2 | c.3380A>G | p.His1127Arg | missense variant | moderate | contig2621 | 343423 | A/G |
|
PHL-2 | c.3381T>A | p.His1127Gln | missense variant | moderate | contig2621 | 343424 | T/A |
|
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PKSG-2b | c.774G>A | p.Met258Ile | missense variant | moderate | contig700 | 1950864 | C/T | |
PKSG-2b | c.31A>T | p.Thr11Ser | missense variant | moderate | contig700 | 1951851 | T/A | |
PKSG-4b |
c.535_545del |
p.Ile179fs | frameshift variant | high | contig700 | 2721127 |
CCCCACTCCAAT |
|
PKSG-4b | c.523C>T | p.His175Tyr | missense variant | moderate | contig700 | 2721150 | G/A | |
PKSG-4b | c.489delT | p.Phe163fs | frameshift variant | high | contig700 | 2721183 | CA/C | |
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b |
c.353_354ins |
p.Gly119fs | frameshift variant | high | contig700 | 2721319 | T/TGG |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
PKSG-4b | c.316+2T>A | splice donor variant & intron variant | high | contig700 | 2723818 | A/T | ||
PKSG-4b | c.229G>A | p.Gly77Ser | missense variant | moderate | contig700 | 2724206 | C/T |
|
PKSG-4b | c.216G>C | p.Leu72Phe | missense variant | moderate | contig700 | 2724219 | C/G |
|
PKSG-4b | c.206T>C | p.Leu69Ser | missense variant | moderate | contig700 | 2724229 | A/G |
|
PKSG-4b | c.143G>A | p.Arg48Gln | missense variant | moderate | contig700 | 2724292 | C/T |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
FAD2-2 | c.154G>A | p.Val52Ile | missense variant | moderate | contig83 | 1803215 | C/T |
|
FAD2-2 | c.62C>T | p.Pro21Leu | missense variant | moderate | contig83 | 1803307 | G/A |
|
FAD2-2 | c.23G>A | p.Ser8Asn | missense variant | moderate | contig83 | 1803346 | C/T |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.752G>T | p.Gly251Val | missense variant | moderate | contig97 | 242458 | G/T | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 |
c.1230-2_123 |
splice acceptor variant & intron variant | high | contig97 | 243676 | TAG/T | ||
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT4 | c.202T>A | p.Leu68Ile | missense variant | moderate | contig121 | 2828858 | T/A |
|
aPT4 |
c.235_236del |
p.Val79fs | frameshift variant | high | contig121 | 2829030 | ATG/A |
|
aPT4 | c.238delT | p.Ser80fs | frameshift variant | high | contig121 | 2829034 | AT/A |
|
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.727G>T | p.Glu243* | stop gained | high | contig121 | 2841362 | G/T | |
aPT1 | c.864C>G | p.Asn288Lys | missense variant | moderate | contig121 | 2842407 | C/G | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
AAE1-2 | c.688G>A | p.Asp230Asn | missense variant | moderate | contig81 | 209650 | G/A |
|
AAE1-2 | c.1118C>G | p.Thr373Ser | missense variant | moderate | contig81 | 210080 | C/G |
|
AAE1-2 | c.1177G>A | p.Asp393Asn | missense variant | moderate | contig81 | 210139 | G/A |
|
AAE1-2 | c.1415G>A | p.Ser472Asn | missense variant | moderate | contig81 | 210377 | G/A |
|
AAE1-2 | c.1417A>G | p.Thr473Ala | missense variant | moderate | contig81 | 210379 | A/G |
|
AAE1-2 | c.1434G>T | p.Glu478Asp | missense variant | moderate | contig81 | 210396 | G/T |
|
AAE1-2 | c.1541T>C | p.Val514Ala | missense variant | moderate | contig81 | 210503 | T/C |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
EMF2 | c.722C>T | p.Thr241Ile | missense variant | moderate | contig954 | 3050302 | C/T | |
EMF2 | c.1205C>T | p.Ala402Val | missense variant & splice region variant | moderate | contig954 | 3055694 | C/T | |
EMF2 | c.1228A>G | p.Ser410Gly | missense variant | moderate | contig954 | 3055717 | A/G |
|
EMF2 | c.1315G>C | p.Ala439Pro | missense variant | moderate | contig954 | 3055804 | G/C | |
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
AAE1-3 | c.722G>A | p.Arg241Lys | missense variant | moderate | contig976 | 1083132 | C/T |
|
AAE1-3 | c.659G>A | p.Arg220Gln | missense variant | moderate | contig976 | 1083195 | C/T |
|
AAE1-3 | c.634G>C | p.Gly212Arg | missense variant | moderate | contig976 | 1083220 | C/G |
|
AAE1-3 | c.199A>G | p.Asn67Asp | missense variant | moderate | contig976 | 1083876 | T/C |
|
AAE1-3 | c.188A>G | p.Asn63Ser | missense variant | moderate | contig976 | 1083887 | T/C |
|
PIE1-1 |
c.1124_1153d |
p.Asn375_Asp |
disruptive inframe insertion | moderate | contig1225 | 2281360 |
A/ATGAACCAAC |
|
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
PKSB-3 |
c.1850_1852d |
p.Met617dup | disruptive inframe insertion | moderate | contig93 | 3339945 | A/AGAT |
|
Nearest genetic relatives (All Samples)
- 0.223 MENDO BREATH (RSP11242)
- 0.238 Deadwood Skunk (RSP12728)
- 0.244 Mendo Breath (RSP11747)
- 0.247 Big E AKA Sour Dream (RSP12727)
- 0.253 Grand Daddy Pink Diesel (RSP12731)
- 0.254 Mendo Purple (RSP11494)
- 0.258 Super Blue Dream (RSP11011)
- 0.259 JL X NSPM1 7 (RSP11469)
- 0.259 Serious Happiness (RSP10763)
- 0.261 Domnesia (RSP11184)
- 0.263 Grape Jelly s (RSP12640)
- 0.264 Sour Raspberry (RSP10551)
- 0.267 Rest (RSP11377)
- 0.267 Eagle Scout T-111 (RSP11625)
- 0.269 JL Cross 26 (RSP11527)
- 0.269 JABBA S STASH (RSP11348)
- 0.270 SPQ (RSP11370)
- 0.270 Doug s Varin (RSP11243)
- 0.270 Trump x Trump (RSP11466)
- 0.271 Electra (RSP11366)
Nearest genetic relatives (Base Tree)
- 0.263 Sour Raspberry (RSP10551)
- 0.275 RKM-2018-009 (RSP11100)
- 0.285 Hermaphrodite Research Sample1 (RSP11049)
- 0.287 Hermaphrodite ResearchSample2 (RSP11050)
- 0.289 RKM-2018-032 (RSP11124)
- 0.292 Blueberry Cheesecake (RSP10680)
- 0.298 Blueberry Cheesecake (RSP10684)
- 0.300 RKM-2018-029 (RSP11121)
- 0.302 Durban Poison (RSP11014)
- 0.302 QUEEN JESUS (RSP10105)
- 0.311 Black Beauty (RSP11035)
- 0.312 RKM-2018-033 (RSP11125)
- 0.312 RKM-2018-005 (RSP11096)
- 0.316 RKM-2018-028 (RSP11120)
- 0.317 Golden Goat 2 (RSP10991)
- 0.317 The Gift (RSP10988)
- 0.318 RKM-2018-003 (RSP11094)
- 0.318 RKM-2018-002 (RSP11093)
- 0.319 Cbot-2019-006 (RSP11134)
- 0.320 RKM-2018-034 (RSP11126)
Most genetically distant strains (All Samples)
- 0.448 Cherry Blossom (RSP11309)
- 0.447 Cherry Blossom (RSP11317)
- 0.446 Cherry Blossom (RSP11328)
- 0.428 Cherry Blossom (RSP11333)
- 0.428 Cherry Blossom (RSP11314)
- 0.424 Cherry Blossom (RSP11311)
- 0.422 Cherry Blossom (RSP11324)
- 0.422 80E (RSP11213)
- 0.420 Northern Skunk (RSP11456)
- 0.419 Unknown- Cherry Wine - 003 (RSP11270)
- 0.417 Tiger Tail 30 (RSP11484)
- 0.415 AVIDEKEL 2 0 (RSP11174)
- 0.415 Cherry Blossom (RSP11300)
- 0.412 Cherry Blossom (RSP11330)
- 0.412 Tanao Sri-white-T1 (RSP11658)
- 0.409 CBD2 V 2 (RSP12669)
- 0.409 Tanao Sri-white 80 (RSP11621)
- 0.408 BagSeed (RSP12627)
- 0.408 Cherry Blossom (RSP11298)
- 0.408 Cherry Blossom (RSP11335)
Most genetically distant strains (Base Tree)
- 0.415 Cbot-2019-005 (RSP11133)
- 0.396 Cherry (RSP11142)
- 0.387 JL yellow (RSP11075)
- 0.383 RKM-2018-023 (RSP11115)
- 0.377 Monoica (RSP10241)
- 0.372 Cbot-2019-001 (RSP11129)
- 0.368 Skunk 18 (RSP11038)
- 0.365 KYRG-11 (RSP11051)
- 0.365 USO 31 (RSP10981)
- 0.363 Kyrgyz Gold (RSP11054)
- 0.359 Kush Hemp E1 (RSP11128)
- 0.358 Feral (RSP10890)
- 0.357 RKM-2018-027 (RSP11119)
- 0.355 Carmagnola (RSP11037)
- 0.354 Jiangji (RSP10653)
- 0.353 Pie Hoe (RSP11073)
- 0.353 Ivory (RSP10668)
- 0.353 Futura 75 (RSP10664)
- 0.351 Carmagnola (RSP10979)
- 0.351 RKM-2018-018 (RSP11110)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 9
- Concordance:
- 8
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 3
- Concordance:
- 3
Blockchain Registration Information
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4603f512158e3258
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