Eucalyptus
RSP 12803
Grower: Devi
General Information
- Sample Name
- Eucalyptus-20221019
- Accession Date
- October 19, 2022
- Reported Plant Sex
- Female
- Report Type
- StrainSEEK v3 10Mb
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
Variants (Select Genes of Interest)
PHL-2 | c.455A>C | p.Asp152Ala | missense variant | moderate | contig2621 | 339191 | A/C | |
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2756A>C | p.Glu919Ala | missense variant | moderate | contig2621 | 342799 | A/C | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.2830A>G | p.Asn944Asp | missense variant | moderate | contig2621 | 342873 | A/G |
|
PHL-2 |
c.2903_2905d |
p.Ser968dup | disruptive inframe insertion | moderate | contig2621 | 342939 | T/TGCA | |
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PHL-2 | c.3552delG | p.Lys1185fs | frameshift variant | high | contig2621 | 343593 | CG/C |
|
PKSG-4b | c.431T>G | p.Val144Gly | missense variant | moderate | contig700 | 2721242 | A/C | |
PKSG-4b |
c.352_355del |
p.Thr118fs | frameshift variant | high | contig700 | 2721317 | CCTGT/C |
|
PKSG-4b | c.323A>G | p.Glu108Gly | missense variant | moderate | contig700 | 2721350 | T/C |
|
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
DXR-2 | c.431C>G | p.Ala144Gly | missense variant | moderate | contig380 | 287760 | G/C | |
FAD2-2 | c.161T>A | p.Leu54His | missense variant | moderate | contig83 | 1803208 | A/T |
|
FAD2-2 | c.64G>T | p.Ala22Ser | missense variant | moderate | contig83 | 1803305 | C/A |
|
FAD2-2 | c.62C>T | p.Pro21Leu | missense variant | moderate | contig83 | 1803307 | G/A |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 |
c.1803_1805d |
p.His601del | disruptive inframe deletion | moderate | contig97 | 244625 | ACAT/A |
|
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.2141C>G | p.Pro714Arg | missense variant | moderate | contig97 | 244972 | C/G | |
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
HDS-2 |
c.82_93delGT |
p.Val28_Thr3 |
conservative inframe deletion | moderate | contig95 | 1989748 |
CGTAACCGGAAC |
|
HDS-2 | c.127T>G | p.Ser43Ala | missense variant | moderate | contig95 | 1989794 | T/G |
|
PHL-1 | c.2651C>T | p.Ala884Val | missense variant | moderate | contig1439 | 1487146 | G/A | |
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2561A>T | p.Asn854Ile | missense variant | moderate | contig1439 | 1487236 | T/A | |
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
HDS-1 | c.35G>A | p.Cys12Tyr | missense variant | moderate | contig1891 | 889357 | C/T | |
PIE1-2 | c.6773T>C | p.Leu2258Ser | missense variant | moderate | contig1460 | 1184314 | A/G | |
PIE1-2 | c.6623C>T | p.Ala2208Val | missense variant | moderate | contig1460 | 1184464 | G/A | |
PIE1-2 | c.3512A>G | p.Lys1171Arg | missense variant | moderate | contig1460 | 1188528 | T/C | |
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FT | c.240C>G | p.Asn80Lys | missense variant | moderate | contig1561 | 3124664 | C/G |
|
FLD | c.2981T>C | p.Met994Thr | missense variant | moderate | contig1450 | 2044012 | A/G | |
FLD | c.2964C>A | p.Asp988Glu | missense variant | moderate | contig1450 | 2044029 | G/T | |
FLD | c.125G>A | p.Ser42Asn | missense variant | moderate | contig1450 | 2047909 | C/T | |
PIE1-1 | c.100G>A | p.Glu34Lys | missense variant | moderate | contig1225 | 2277786 | G/A | |
PIE1-1 | c.1222C>G | p.Gln408Glu | missense variant | moderate | contig1225 | 2281482 | C/G | |
PIE1-1 | c.6725C>T | p.Ala2242Val | missense variant | moderate | contig1225 | 2289290 | C/T | |
GGR | c.212G>T | p.Cys71Phe | missense variant | moderate | contig2282 | 549204 | G/T | |
GGR | c.704A>T | p.His235Leu | missense variant | moderate | contig2282 | 549696 | A/T |
|
Nearest genetic relatives (All Samples)
- 0.175 Gorilla Cookies (RSP11231)
- 0.177 Mother s Milk No 31 (RSP11623)
- 0.192 Mothers Milk 5 (RSP11186)
- 0.195 Rainbow Belts 2 0 (RSP12802)
- 0.197 SHERBERT (RSP11355)
- 0.201 Skywalker OG (RSP10837)
- 0.202 RKM-2018-034 (RSP11126)
- 0.204 Motor Breath 15 (RSP12093)
- 0.205 SFVxTK (RSP11072)
- 0.207 JL Tent 2 (RSP11489)
- 0.208 Rootbeer Rolex 50 (RSP12645)
- 0.208 Center Mark (RSP11629)
- 0.211 JL Tent 3 (RSP11490)
- 0.211 501st OG (RSP11241)
- 0.213 Old Family Purple (RSP12098)
- 0.216 Pieface (RSP12794)
- 0.216 Casco Kush (RSP11167)
- 0.216 A15 (RSP12655)
- 0.216 NSPM x NSPM (RSP11487)
- 0.217 NSPM1 (RSP11362)
Nearest genetic relatives (Base Tree)
- 0.201 RKM-2018-034 (RSP11126)
- 0.202 Skywalker OG (RSP10837)
- 0.235 RKM-2018-032 (RSP11124)
- 0.237 RKM-2018-026 (RSP11118)
- 0.242 The Gift (RSP10988)
- 0.243 RKM-2018-002 (RSP11093)
- 0.245 Hermaphrodite ResearchSample2 (RSP11050)
- 0.251 RKM-2018-009 (RSP11100)
- 0.259 Hermaphrodite Research Sample1 (RSP11049)
- 0.260 Blueberry Cheesecake (RSP10680)
- 0.260 Pie Hoe (RSP11073)
- 0.261 Gold Cracker (RSP11048)
- 0.261 RKM-2018-020 (RSP11112)
- 0.263 Blueberry Cheesecake (RSP10684)
- 0.267 Liberty Haze (RSP11000)
- 0.270 Durban Poison (RSP11014)
- 0.278 Golden Goat 2 (RSP10991)
- 0.281 RKM-2018-005 (RSP11096)
- 0.282 RKM-2018-033 (RSP11125)
- 0.286 Blue Dream (RSP11033)
Most genetically distant strains (All Samples)
- 0.461 Cherry Blossom (RSP11311)
- 0.440 Cherry Blossom (RSP11317)
- 0.439 Cherry Blossom (RSP11323)
- 0.437 Cherry Blossom (RSP11328)
- 0.431 Cherry Blossom (RSP11318)
- 0.431 Cherry Blossom (RSP11314)
- 0.429 Northern Skunk (RSP11456)
- 0.423 CS (RSP11208)
- 0.421 80E (RSP11213)
- 0.418 Unknown- Cherry Wine - 001 (RSP11268)
- 0.417 Cherry Blossom (RSP11333)
- 0.416 Cherry Blossom (RSP11312)
- 0.415 Unknown- Cherry Wine - 003 (RSP11270)
- 0.414 Cherry Blossom (RSP11330)
- 0.412 Tanao Sri 46 (RSP11486)
- 0.410 Cherry Blossom (RSP11298)
- 0.409 Cherry Blossom (RSP11335)
- 0.408 Cherry Blossom (RSP11308)
- 0.408 Avidekel (RSP10938)
- 0.408 Tanao Sri-white-T1 (RSP11658)
Most genetically distant strains (Base Tree)
- 0.405 Cbot-2019-005 (RSP11133)
- 0.398 Cherry (RSP11142)
- 0.387 Futura 75 (RSP10664)
- 0.383 Lovrin (RSP10658)
- 0.382 RKM-2018-022 (RSP11114)
- 0.378 Carmagnola (RSP11037)
- 0.377 Monoica (RSP10241)
- 0.376 Cherry (RSP11143)
- 0.375 Santhica27 (RSP11047)
- 0.373 USO 31 (RSP10981)
- 0.372 Fedora 17 (RSP10661)
- 0.372 JL yellow (RSP11075)
- 0.369 Ivory (RSP10668)
- 0.367 Feral (RSP10890)
- 0.365 Carmagnola (RSP10979)
- 0.363 Cbot-2019-001 (RSP11129)
- 0.358 RKM-2018-019 (RSP11111)
- 0.355 KYRG-11 (RSP11051)
- 0.354 Tisza (RSP11044)
- 0.351 Blueberry Cheesecake (RSP10672)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 86
- Concordance:
- 57
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 5
- Concordance:
- 5
Blockchain Registration Information
- Transaction ID
-
37cd96cc152329be
5aa3a2803f956a05 78c0892c6bd883d5 6f44c713eceaff5f - Stamping Certificate
- Download PDF (39.8 KB)
- SHASUM Hash
-
c0018360a6a08084
4f5f21bd59c4cb79 cdf2d8a5700bfd61 7e9d65eb4c264ecc