IUL1
SRR 14708254
General Information
- Accession Date
- May 31, 2021
- Reported Plant Sex
- not reported
- Report Type
- Whole-Genome Sequencing
The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.
Chemical Information
Cannabinoid and terpenoid information provided by the grower.
Cannabinoids
No information provided.
Terpenoids
No information provided.
Genetic Information
- Plant Type
- Type I
File Downloads
The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.
The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).



This chart represents the Illumina sequence coverage over the CBCA synthase gene.

Variants (THCAS, CBDAS, and CBCAS)
No variants to report
Variants (Select Genes of Interest)
GPPs1 | c.744C>G | p.Asp248Glu | missense variant | moderate | contig676 | 168993 | C/G |
|
GPPs1 |
c.845_848del |
p.Glu282fs | frameshift variant | high | contig676 | 169629 | TGAAA/T |
|
GPPs1 | c.896A>G | p.Asn299Ser | missense variant | moderate | contig676 | 169772 | A/G |
|
PHL-2 | c.455A>C | p.Asp152Ala | missense variant | moderate | contig2621 | 339191 | A/C | |
PHL-2 | c.722G>A | p.Gly241Glu | missense variant | moderate | contig2621 | 339860 | G/A |
|
PHL-2 | c.932T>C | p.Leu311Pro | missense variant | moderate | contig2621 | 340210 | T/C | |
PHL-2 | c.977A>C | p.His326Pro | missense variant | moderate | contig2621 | 340255 | A/C |
|
PHL-2 | c.985T>A | p.Phe329Ile | missense variant | moderate | contig2621 | 340263 | T/A |
|
PHL-2 | c.1079T>C | p.Ile360Thr | missense variant | moderate | contig2621 | 340357 | T/C |
|
PHL-2 | c.1837G>A | p.Glu613Lys | missense variant | moderate | contig2621 | 341115 | G/A |
|
PHL-2 | c.2564T>A | p.Phe855Tyr | missense variant | moderate | contig2621 | 342607 | T/A | |
PHL-2 | c.2578T>A | p.Leu860Ile | missense variant | moderate | contig2621 | 342621 | T/A | |
PHL-2 | c.2756A>C | p.Glu919Ala | missense variant | moderate | contig2621 | 342799 | A/C | |
PHL-2 | c.2783G>A | p.Ser928Asn | missense variant | moderate | contig2621 | 342826 | G/A | |
PHL-2 | c.2830A>C | p.Asn944His | missense variant | moderate | contig2621 | 342873 | A/C |
|
PHL-2 |
c.2903_2905d |
p.Ser968dup | disruptive inframe insertion | moderate | contig2621 | 342939 | T/TGCA | |
PHL-2 | c.2933G>T | p.Arg978Leu | missense variant | moderate | contig2621 | 342976 | G/T | |
PHL-2 | c.2936T>G | p.Val979Gly | missense variant | moderate | contig2621 | 342979 | T/G |
|
PHL-2 | c.3209A>G | p.Gln1070Arg | missense variant | moderate | contig2621 | 343252 | A/G | |
PHL-2 | c.3379C>G | p.His1127Asp | missense variant | moderate | contig2621 | 343422 | C/G |
|
PHL-2 | c.3380A>G | p.His1127Arg | missense variant | moderate | contig2621 | 343423 | A/G |
|
PHL-2 | c.3381T>A | p.His1127Gln | missense variant | moderate | contig2621 | 343424 | T/A |
|
PHL-2 | c.3467A>G | p.Gln1156Arg | missense variant | moderate | contig2621 | 343510 | A/G | |
PHL-2 |
c.3543_3544i |
p.Thr1182fs | frameshift variant | high | contig2621 | 343586 | G/GT |
|
PHL-2 | c.3552delG | p.Lys1185fs | frameshift variant | high | contig2621 | 343593 | CG/C |
|
PKSG-4b | c.316+2T>A | splice donor variant & intron variant | high | contig700 | 2723818 | A/T | ||
PKSG-4b |
c.235_239dup |
p.Phe80fs | frameshift variant | high | contig700 | 2724195 | G/GAATCT |
|
PKSG-4b | c.229G>A | p.Gly77Ser | missense variant | moderate | contig700 | 2724206 | C/T |
|
PKSG-4b | c.216G>C | p.Leu72Phe | missense variant | moderate | contig700 | 2724219 | C/G |
|
PKSG-4b | c.134G>A | p.Arg45Gln | missense variant | moderate | contig700 | 2724301 | C/T |
|
PKSG-2a | c.67T>A | p.Phe23Ile | missense variant | moderate | contig700 | 1945567 | A/T | |
DXR-2 | c.1319T>C | p.Ile440Thr | missense variant | moderate | contig380 | 285250 | A/G |
|
ELF3 | c.358G>A | p.Gly120Arg | missense variant | moderate | contig97 | 242064 | G/A | |
ELF3 | c.520A>C | p.Asn174His | missense variant | moderate | contig97 | 242226 | A/C | |
ELF3 | c.574A>G | p.Asn192Asp | missense variant | moderate | contig97 | 242280 | A/G | |
ELF3 | c.757C>T | p.Pro253Ser | missense variant | moderate | contig97 | 242463 | C/T | |
ELF3 | c.772A>G | p.Ser258Gly | missense variant | moderate | contig97 | 242478 | A/G |
|
ELF3 | c.811G>A | p.Gly271Arg | missense variant | moderate | contig97 | 242517 | G/A |
|
ELF3 | c.812G>C | p.Gly271Ala | missense variant | moderate | contig97 | 242518 | G/C | |
ELF3 | c.1466G>A | p.Ser489Asn | missense variant | moderate | contig97 | 244297 | G/A |
|
ELF3 | c.1473A>C | p.Lys491Asn | missense variant | moderate | contig97 | 244304 | A/C |
|
ELF3 | c.1630A>G | p.Thr544Ala | missense variant | moderate | contig97 | 244461 | A/G | |
ELF3 | c.1966C>G | p.Pro656Ala | missense variant | moderate | contig97 | 244797 | C/G | |
ELF3 | c.1982A>C | p.Asn661Thr | missense variant | moderate | contig97 | 244813 | A/C |
|
ELF3 | c.2198G>T | p.Arg733Leu | missense variant | moderate | contig97 | 245029 | G/T | |
aPT1 | c.406A>G | p.Ile136Val | missense variant | moderate | contig121 | 2839605 | A/G | |
aPT1 | c.574A>T | p.Met192Leu | missense variant | moderate | contig121 | 2840182 | A/T |
|
aPT1 | c.670T>A | p.Ser224Thr | missense variant | moderate | contig121 | 2840278 | T/A |
|
aPT1 | c.727G>T | p.Glu243* | stop gained | high | contig121 | 2841362 | G/T | |
aPT1 | c.766T>C | p.Tyr256His | missense variant | moderate | contig121 | 2841545 | T/C |
|
aPT1 | c.864C>G | p.Asn288Lys | missense variant | moderate | contig121 | 2842407 | C/G | |
AAE1-2 | c.133T>A | p.Phe45Ile | missense variant | moderate | contig81 | 209095 | T/A |
|
AAE1-2 | c.331A>G | p.Asn111Asp | missense variant | moderate | contig81 | 209293 | A/G |
|
AAE1-2 | c.374A>G | p.His125Arg | missense variant | moderate | contig81 | 209336 | A/G |
|
AAE1-2 | c.976A>C | p.Thr326Pro | missense variant | moderate | contig81 | 209938 | A/C |
|
AAE1-2 | c.1006A>G | p.Lys336Glu | missense variant | moderate | contig81 | 209968 | A/G |
|
AAE1-2 | c.1090A>G | p.Lys364Glu | missense variant | moderate | contig81 | 210052 | A/G |
|
AAE1-2 | c.1102C>A | p.His368Asn | missense variant | moderate | contig81 | 210064 | C/A |
|
AAE1-2 | c.1118C>G | p.Thr373Ser | missense variant | moderate | contig81 | 210080 | C/G |
|
AAE1-2 | c.1177G>A | p.Asp393Asn | missense variant | moderate | contig81 | 210139 | G/A |
|
PHL-1 | c.2669A>T | p.Asn890Ile | missense variant | moderate | contig1439 | 1487128 | T/A |
|
PHL-1 | c.2623A>G | p.Thr875Ala | missense variant | moderate | contig1439 | 1487174 | T/C |
|
PHL-1 | c.2551A>G | p.Thr851Ala | missense variant | moderate | contig1439 | 1487246 | T/C | |
PHL-1 | c.1387A>G | p.Thr463Ala | missense variant | moderate | contig1439 | 1489811 | T/C | |
PHL-1 | c.407G>A | p.Arg136Gln | missense variant | moderate | contig1439 | 1491441 | C/T | |
PHL-1 | c.196G>C | p.Val66Leu | missense variant | moderate | contig1439 | 1492797 | C/G |
|
PHL-1 | c.176G>A | p.Gly59Glu | missense variant | moderate | contig1439 | 1492817 | C/T |
|
PHL-1 | c.175G>A | p.Gly59Arg | missense variant | moderate | contig1439 | 1492818 | C/T | |
PKSG-2b | c.1152T>A | p.Asn384Lys | missense variant | moderate | contig700 | 1950486 | A/T | |
PKSG-2b | c.1132C>G | p.Leu378Val | missense variant | moderate | contig700 | 1950506 | G/C |
|
PKSG-2b | c.1117A>G | p.Ile373Val | missense variant | moderate | contig700 | 1950521 | T/C | |
PKSG-2b | c.934C>T | p.His312Tyr | missense variant | moderate | contig700 | 1950704 | G/A |
|
HDS-1 | c.1618A>G | p.Ile540Val | missense variant | moderate | contig1891 | 885936 | T/C | |
HDS-1 | c.1378G>A | p.Val460Ile | missense variant | moderate | contig1891 | 886370 | C/T |
|
HDS-1 | c.56C>G | p.Ala19Gly | missense variant | moderate | contig1891 | 889336 | G/C | |
PIE1-2 | c.6773T>C | p.Leu2258Ser | missense variant | moderate | contig1460 | 1184314 | A/G | |
PIE1-2 | c.5932A>G | p.Ile1978Val | missense variant | moderate | contig1460 | 1185552 | T/C | |
PIE1-2 | c.1872T>A | p.Asp624Glu | missense variant | moderate | contig1460 | 1190252 | A/T | |
PIE1-2 | c.1318A>G | p.Asn440Asp | missense variant | moderate | contig1460 | 1192080 | T/C | |
PIE1-2 | c.1294G>A | p.Asp432Asn | missense variant | moderate | contig1460 | 1192104 | C/T | |
PIE1-2 | c.1289A>G | p.Asp430Gly | missense variant | moderate | contig1460 | 1192109 | T/C |
|
PIE1-2 | c.1279G>A | p.Val427Ile | missense variant | moderate | contig1460 | 1192119 | C/T | |
EMF2 |
c.1412_1413i |
p.Phe471_His |
disruptive inframe insertion | moderate | contig954 | 3056599 | T/TCCATTC |
|
EMF2 | c.1417T>A | p.Ser473Thr | missense variant | moderate | contig954 | 3056604 | T/A |
|
EMF2 | c.1418C>G | p.Ser473Trp | missense variant | moderate | contig954 | 3056605 | C/G |
|
EMF2 | c.1772A>G | p.Gln591Arg | missense variant | moderate | contig954 | 3059929 | A/G | |
FT | c.419G>A | p.Ser140Asn | missense variant | moderate | contig1561 | 3126658 | G/A | |
aPT4 | c.80A>G | p.Lys27Arg | missense variant | moderate | contig121 | 2828736 | A/G |
|
aPT4 | c.202T>A | p.Leu68Ile | missense variant | moderate | contig121 | 2828858 | T/A |
|
aPT4 | c.517A>T | p.Ile173Leu | missense variant & splice region variant | moderate | contig121 | 2830795 | A/T |
|
aPT4 | c.757G>T | p.Val253Leu | missense variant | moderate | contig121 | 2831364 | G/T |
|
aPT4 | c.845C>T | p.Ala282Val | missense variant | moderate | contig121 | 2832503 | C/T |
|
FLD | c.2981T>C | p.Met994Thr | missense variant | moderate | contig1450 | 2044012 | A/G | |
FLD | c.2964C>A | p.Asp988Glu | missense variant | moderate | contig1450 | 2044029 | G/T | |
FLD | c.2686G>A | p.Ala896Thr | missense variant | moderate | contig1450 | 2044848 | C/T | |
FLD | c.2681T>C | p.Ile894Thr | missense variant | moderate | contig1450 | 2044853 | A/G | |
AAE1-3 | c.722G>A | p.Arg241Lys | missense variant | moderate | contig976 | 1083132 | C/T |
|
AAE1-3 | c.659G>A | p.Arg220Gln | missense variant | moderate | contig976 | 1083195 | C/T |
|
AAE1-3 | c.634G>C | p.Gly212Arg | missense variant | moderate | contig976 | 1083220 | C/G |
|
AAE1-3 | c.487A>T | p.Met163Leu | missense variant | moderate | contig976 | 1083538 | T/A |
|
AAE1-3 | c.467T>C | p.Met156Thr | missense variant | moderate | contig976 | 1083558 | A/G |
|
AAE1-3 | c.416T>C | p.Leu139Pro | missense variant | moderate | contig976 | 1083609 | A/G |
|
AAE1-3 | c.382T>C | p.Tyr128His | missense variant | moderate | contig976 | 1083643 | A/G |
|
AAE1-3 | c.327G>T | p.Trp109Cys | missense variant | moderate | contig976 | 1083698 | C/A |
|
AAE1-3 | c.301A>T | p.Thr101Ser | missense variant | moderate | contig976 | 1083724 | T/A |
|
AAE1-3 | c.293A>G | p.Asp98Gly | missense variant | moderate | contig976 | 1083732 | T/C |
|
AAE1-3 | c.199A>G | p.Asn67Asp | missense variant | moderate | contig976 | 1083876 | T/C |
|
AAE1-3 | c.188A>G | p.Asn63Ser | missense variant | moderate | contig976 | 1083887 | T/C |
|
AAE1-3 | c.167A>G | p.Glu56Gly | missense variant | moderate | contig976 | 1083908 | T/C |
|
AAE1-3 | c.147G>T | p.Gln49His | missense variant | moderate | contig976 | 1083928 | C/A |
|
AAE1-3 | c.125A>G | p.Glu42Gly | missense variant | moderate | contig976 | 1083950 | T/C |
|
AAE1-3 | c.80C>T | p.Thr27Ile | missense variant | moderate | contig976 | 1083995 | G/A |
|
AAE1-3 | c.79A>G | p.Thr27Ala | missense variant | moderate | contig976 | 1083996 | T/C |
|
AAE1-3 | c.68G>A | p.Trp23* | stop gained | high | contig976 | 1084007 | C/T |
|
AAE1-3 | c.52G>A | p.Gly18Ser | missense variant | moderate | contig976 | 1084023 | C/T |
|
AAE1-3 | c.48C>A | p.Cys16* | stop gained | high | contig976 | 1084027 | G/T |
|
AAE1-3 | c.14C>T | p.Ala5Val | missense variant | moderate | contig976 | 1084061 | G/A |
|
GGR | c.32C>A | p.Thr11Lys | missense variant | moderate | contig2282 | 549024 | C/A |
|
GGR | c.317C>T | p.Pro106Leu | missense variant | moderate | contig2282 | 549309 | C/T | |
GGR | c.358G>A | p.Ala120Thr | missense variant | moderate | contig2282 | 549350 | G/A |
|
GGR | c.382C>T | p.Leu128Phe | missense variant | moderate | contig2282 | 549374 | C/T |
|
GGR | c.456T>A | p.His152Gln | missense variant | moderate | contig2282 | 549448 | T/A |
|
GGR | c.460G>A | p.Asp154Asn | missense variant | moderate | contig2282 | 549452 | G/A |
|
GGR | c.541G>A | p.Val181Ile | missense variant | moderate | contig2282 | 549533 | G/A |
|
PKSB-3 | c.188A>T | p.Tyr63Phe | missense variant | moderate | contig93 | 3333945 | A/T |
|
PKSB-3 |
c.1880_1891d |
p.His627_Gly |
disruptive inframe deletion | moderate | contig93 | 3339981 |
CTGGCCATGGCC |
|
PKSB-3 | c.1901C>G | p.Ala634Gly | missense variant | moderate | contig93 | 3340008 | C/G |
|
Nearest genetic relatives (All Samples)
- 0.191 Lift (RSP11378)
- 0.197 AOAC MI 542 (RSP11755)
- 0.202 AOAC MI 545 (RSP11756)
- 0.205 Electra (RSP11366)
- 0.207 AOAC MI 533 (RSP11753)
- 0.208 Durban Poison 1 (RSP10996)
- 0.208 AOAC MI 567 (RSP11758)
- 0.209 AOAC MI 548 (RSP11757)
- 0.211 AOAC MI 569 (RSP11759)
- 0.213 AOAC MI 535 (RSP11754)
- 0.213 Badger (RSP11614)
- 0.213 IBR2 (SRR14708250)
- 0.214 AOAC MI 504 (RSP11749)
- 0.214 AOAC MI 508 (RSP11750)
- 0.214 AOAC MI 532 (RSP11752)
- 0.214 AOAC MI 597 (RSP11761)
- 0.215 IUL3 (SRR14708252)
- 0.216 Serious Happiness (RSP10763)
- 0.217 AOAC MI 501 (RSP11748)
- 0.218 AOAC MI 588 (RSP11760)
Nearest genetic relatives (Base Tree)
- 0.224 Hermaphrodite ResearchSample2 (RSP11050)
- 0.250 UP Sunrise (RSP10989)
- 0.264 RKM-2018-027 (RSP11119)
- 0.270 Liberty Haze (RSP11000)
- 0.272 KYRG-11 (RSP11051)
- 0.279 RKM-2018-031 (RSP11123)
- 0.279 Recon (RSP10755)
- 0.287 Kyrgyz Gold (RSP11054)
- 0.288 Hermaphrodite Research Sample1 (RSP11049)
- 0.292 Jiangji (RSP10653)
- 0.293 Golden Goat 2 (RSP10991)
- 0.293 RKM-2018-029 (RSP11121)
- 0.294 RKM-2018-020 (RSP11112)
- 0.295 RKM-2018-028 (RSP11120)
- 0.299 Cherry (RSP11143)
- 0.301 RKM-2018-003 (RSP11094)
- 0.301 RKM-2018-006 (RSP11097)
- 0.305 Cbot-2019-001 (RSP11129)
- 0.307 CST (RSP11002)
- 0.308 Blueberry Cheesecake (RSP10684)
Most genetically distant strains (All Samples)
- 0.412 JL 3rd Gen Father (RSP11196)
- 0.410 JL yellow (RSP11075)
- 0.410 Cbot-2019-005 (RSP11133)
- 0.409 JL 4th Gen 5 (RSP11199)
- 0.408 CS (RSP11208)
- 0.398 Feral (RSP11205)
- 0.397 JL 3rd Gen Mother (RSP11197)
- 0.394 80E (RSP11213)
- 0.389 Abacus (RSP11266)
- 0.388 Kush Hemp E1 (RSP11128)
- 0.387 JL 4th Gen 1 (RSP11193)
- 0.386 Feral (RSP11206)
- 0.385 JL 4th Gen 2 (RSP11194)
- 0.384 Blue Dream (RSP11342)
- 0.382 Blue Dream (RSP11227)
- 0.381 Right Mark (RSP11628)
- 0.379 Chematonic Cannatonic x Chemdawg (RSP11394)
- 0.375 JL 3rd Gen Mother (RSP11214)
- 0.375 Northern Lights (RSP11501)
- 0.373 Tiger Tail 30 (RSP11484)
Most genetically distant strains (Base Tree)
- 0.414 JL yellow (RSP11075)
- 0.401 Kush Hemp E1 (RSP11128)
- 0.392 Cbot-2019-005 (RSP11133)
- 0.386 Monoica (RSP10241)
- 0.380 Carmagnola (RSP10979)
- 0.375 Black Beauty (RSP11035)
- 0.373 Skywalker OG (RSP10837)
- 0.368 RKM-2018-034 (RSP11126)
- 0.366 USO 31 (RSP10981)
- 0.364 Gold Cracker (RSP11048)
- 0.362 Cbot-2019-004 (RSP11132)
- 0.361 RKM-2018-002 (RSP11093)
- 0.360 Sour Raspberry (RSP10551)
- 0.360 Skunk 18 (RSP11038)
- 0.358 RKM-2018-009 (RSP11100)
- 0.356 RKM-2018-033 (RSP11125)
- 0.354 Blue Dream (RSP11033)
- 0.348 Carmagnola (RSP11037)
- 0.345 RKM-2018-026 (RSP11118)
- 0.343 Feral (RSP10890)
Nearest genetic relative in Phylos dataset
- Overlapping SNPs:
- 6
- Concordance:
- 5
Nearest genetic relative in Lynch dataset
- Overlapping SNPs:
- 4
- Concordance:
- 4