General Information
Chemical Information*
Cannabinoid and Terpenoid information provided by our Partner Labs.
CANNABINOIDS
THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A
TERPENOIDS
- α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
-
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A
Genetic Information
View this strain on the Phylotree
Percent Heterozygosity: 0.82
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM
Plant Type: Type I
Percent Heterozygosity: 0.82
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM
Plant Type: Type I
CBCAS COVERAGE ![]() What does this visualization mean? |
Y-RATIO DISTRIBUTION ![]() What does this visualization mean? |
VARIANTS (THCAS, CBDAS, and CBCAS)
Gene | HGVS.c | HGVS.p | Annotation | Annotation Impact | Contig | Contig Pos | Ref/Alt | Var Freq |
---|
NEAREST GENETIC RELATIVES TO RKM-2018-003:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP10460-Cheese | 1.13 | 2 | RSP11112-RKM-2018-020 | 5.23 | 3 | RSP10990-Italian Kiss | 5.48 | 4 | RSP11034-Italian Kiss | 5.72 | 5 | RSP10603-Black Jack | 5.81 | 6 | RSP11346-BLACK JACK | 6.22 | 7 | RSP11108-RKM-2018-016 | 6.26 | 8 | RSP11117-RKM-2018-025 | 6.26 | 9 | RSP11243-Doug's Varin | 6.3 | 10 | RSP10763-Serious Happiness | 6.31 | 11 | RSP11122-RKM-2018-030 | 6.34 | 12 | RSP11011-Super Blue Dream | 6.34 | 13 | RSP10996-Durban Poison 1 | 6.37 | 14 | RSP11256-UP Sunset | 6.45 | 15 | RSP11260-UP The Straits | 6.49 | 16 | RSP11014-Durban Poison | 6.56 | 17 | RSP10998-Durban Poison | 6.57 | 18 | RSP11041-Gold Cracker | 6.6 | 19 | RSP11017-Blue Dream | 6.61 | 20 | RSP11013-Durban Poison 1 | 6.63 |
NEAREST GENETIC RELATIVES TO BASE TREE:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11112-RKM-2018-020 | 5.4 | 2 | RSP11034-Italian Kiss | 5.92 | 3 | RSP11119-RKM-2018-027 | 6.8 | 4 | RSP11120-RKM-2018-028 | 6.82 | 5 | RSP11014-Durban Poison | 6.83 | 6 | RSP11002-CST | 6.99 | 7 | RSP11115-RKM-2018-023 | 7.09 | 8 | RSP11048-Gold Cracker | 7.19 | 9 | RSP10991-Golden Goat 2 | 7.26 | 10 | RSP11097-RKM-2018-006 | 7.35 | 11 | RSP11038-Skunk 18 | 7.37 | 12 | RSP11033-Blue Dream | 7.48 | 13 | RSP11049-Hermaphrodite Research Sample1 | 7.6 | 14 | RSP10105-QUEEN JESUS | 7.68 | 15 | RSP11110-RKM-2018-018 | 7.74 | 16 | RSP10989-UP Sunrise | 7.79 | 17 | RSP10684-Blueberry Cheesecake | 7.82 | 18 | RSP11121-RKM-2018-029 | 7.94 | 19 | RSP11132-Cbot-2019-004 | 8.25 | 20 | RSP11050-Hermaphrodite ResearchSample2 | 8.26 |
MOST GENETICALLY DISTANT STRAINS FROM RKM-2018-003:
# | Strain | Genetic Distance |
---|---|---|
1 | RSP11323-Cherry Blossom | 13.6 | 2 | RSP11314-Cherry Blossom | 13.35 | 3 | RSP11333-Cherry Blossom | 12.84 | 4 | RSP11306-Cherry Blossom | 12.75 | 5 | RSP11311-Cherry Blossom | 12.74 | 6 | RSP11334-Cherry Blossom | 12.7 | 7 | RSP11318-Cherry Blossom | 12.63 | 8 | RSP11317-Cherry Blossom | 12.52 | 9 | RSP11322-Cherry Blossom | 12.49 | 10 | RSP11213-80E | 12.28 | 11 | RSP11324-Cherry Blossom | 12.15 | 12 | RSP11205-Feral | 12.14 | 13 | RSP11330-Cherry Blossom | 12.11 | 14 | RSP11329-Cherry Blossom | 12.06 | 15 | RSP11301-Cherry Blossom | 11.97 | 16 | RSP11274-Cherry Blossom | 11.93 | 17 | RSP11326-Cherry Blossom | 11.81 | 18 | RSP11328-Cherry Blossom | 11.76 | 19 | RSP11211-80E | 11.75 | 20 | RSP11208-CS | 11.71 |
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR4448559 | 124 | 113 |
NEAREST GENETIC RELATIVES IN LYNCH DATASET:
Nearest Lynch Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR3495180 | 8 | 8 |
Blockchain Registration Information:
Transaction ID: 26c1172cbea3c38ec17cffb9af4bd35aae5f994a7d49d4d8385571c8b2539a20
Stamping Certificate: PDF
SHASUM Hash: 5c0ef2eeb82aba530f5741572ff275ffb53d07f5ae1ce84e13c2fea3cd764080
Stamping Certificate: PDF
SHASUM Hash: 5c0ef2eeb82aba530f5741572ff275ffb53d07f5ae1ce84e13c2fea3cd764080