Sunday Driver

RSP 11071

Grower: Jungle Boys (Kyle)

General Information

Accession Date
May 14, 2018
Reported Plant Sex
not reported

The strain rarity visualization shows how distant the strain is from the other cultivars in the Kannapedia database. The y-axis represents genetic distance, getting farther as you go up. The width of the visualization at any position along the y-axis shows how many strains there are in the database at that genetic distance. So, a common strain will have a more bottom-heavy shape, while uncommon and rare cultivars will have a visualization that is generally shifted towards the top.

Rarity: Uncommon
Most Distant Most Similar

Chemical Information

Cannabinoid and terpenoid information provided by the grower.

Cannabinoids

No information provided.

Terpenoids

No information provided.

Genetic Information

Plant Type
Type I

The bell curve in the heterozygosity visualization shows the distribution of heterozygosity levels for cannabis cultivars in the Kannapedia database. The green line shows where this particular strain fits within the distribution. Heterozygosity is associated with heterosis (aka hybrid vigor) but also leads to the production of more variable offspring. When plants have two genetically different parents, heterozygosity levels will be higher than if it has been inbred or backcrossed repeatedly.

Heterozygosity: 0.97%
Least Heterozygous Most Heterozygous

The ratio of reads mapped to Y-contigs to reads mapped to the whole Cannabis genome (Y-ratios) has been demonstrated to be strongly correlated with plant sex typing. This plot shows the distribution of Y-ratios for all samples in our database which were sequenced with the same method (panel or WGS) as this sample and where this sample falls in the distribution.

Y-Ratio Distribution: 0.0464
male female RSP11071

This chart represents the Illumina sequence coverage over the Bt/Bd allele. These are the three regions in the cannabis genome that impact THCA, CBDA, CBGA production. Coverage over the Active CBDAS gene is highly correlated with Type II and Type III plants as described by Etienne de Meijer. Coverage over the THCA gene is highly correlated with Type I and Type II plants but is anti-correlated with Type III plants. Type I plants require coverage over the inactive CBDA loci and no coverage over the Active CBDA gene. Lack of coverage over the Active CBDA and Active THCA allele are presumed to be Type IV plants (CBGA dominant). While deletions of entire THCAS and CBDAS genes are the most common Bt:Bd alleles observed, it is possible to have plants with these genes where functional expression of the enzyme is disrupted by deactivating point mutations (Kojoma et al. 2006).

Bt/Bd Allele Coverage

This chart represents the Illumina sequence coverage over the CBCA synthase gene.

CBCAS Coverage

Variants (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
THCAS c.998C>G p.Pro333Arg missense variant moderate contig741 4416830

IGV: Start, Jump

G/C
NGS:
0.182
C90:
0.000

Variants (Select Genes of Interest)

PKSG-2a

UniProt

c.67T>A p.Phe23Ile missense variant moderate contig700 1945567

IGV: Start, Jump

A/T
NGS:
0.825
C90:
0.904
PKSG-2a

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1945603

IGV: Start, Jump

T/A
NGS:
0.763
C90:
0.876
PKSG-2b

UniProt

c.31A>T p.Thr11Ser missense variant moderate contig700 1951851

IGV: Start, Jump

T/A
NGS:
0.844
C90:
0.880
PKSG-4b

UniProt

c.535_545delATTGGAGTGGG p.Ile179fs frameshift variant high contig700 2721127

IGV: Start, Jump

CCCCACTCCAAT/C
NGS:
0.105
C90:
0.000
PKSG-4b

UniProt

c.523C>T p.His175Tyr missense variant moderate contig700 2721150

IGV: Start, Jump

G/A
NGS:
0.112
C90:
0.325
PKSG-4b

UniProt

c.489delT p.Phe163fs frameshift variant high contig700 2721183

IGV: Start, Jump

CA/C
NGS:
0.792
C90:
0.761
aPT1

UniProt

c.629C>T p.Thr210Ile missense variant moderate contig121 2840237

IGV: Start, Jump

C/T
NGS:
0.561
C90:
0.598
HDS-2

UniProt

c.82_93delGTAACCGGAACT p.Val28_Thr31del conservative inframe deletion moderate contig95 1989748

IGV: Start, Jump

CGTAACCGGAACT/C
NGS:
0.805
C90:
0.000

Nearest genetic relatives (All Samples)

0 0.058 0.117 0.175 0.233
clone distance sibling distance more distant
  1. 0.118 Hermaphrodite ResearchSample2 (RSP11050)
  2. 0.127 Hermaphrodite ResearchSample2 (RSP11043)
  3. 0.165 Skywalker OG (RSP10837)
  4. 0.167 SFVxTK (RSP11072)
  5. 0.169 Pie Hoe (RSP11073)
  6. 0.191 Rugburn OG (RSP11353)
  7. 0.195 Red Eye OG (RSP11190)
  8. 0.196 RKM-2018-013 (RSP11104)
  9. 0.200 RKM-2018-034 (RSP11126)
  10. 0.205 SHERBERT (RSP11355)
  11. 0.206 Pure Power Plant (RSP11265)
  12. 0.206 Gorilla Cookies (RSP11231)
  13. 0.209 Blueberry Cheesecake (RSP10684)
  14. 0.209 Blueberry Cheesecake (RSP10680)
  15. 0.210 Garlic (RSP11341)
  16. 0.213 Grape Stomper (RSP11180)
  17. 0.214 RKM-2018-008 (RSP11099)
  18. 0.214 NSPM1 (RSP11362)
  19. 0.218 Casco Kush (RSP11167)
  20. 0.219 501st OG (RSP11241)

Nearest genetic relatives (Base Tree)

0 0.075 0.150 0.225 0.300
clone distance sibling distance more distant
  1. 0.124 Hermaphrodite ResearchSample2 (RSP11050)
  2. 0.167 Skywalker OG (RSP10837)
  3. 0.174 Pie Hoe (RSP11073)
  4. 0.208 Blueberry Cheesecake (RSP10684)
  5. 0.209 RKM-2018-034 (RSP11126)
  6. 0.209 Blueberry Cheesecake (RSP10680)
  7. 0.217 The Gift (RSP10988)
  8. 0.218 RKM-2018-026 (RSP11118)
  9. 0.231 Kimbo Slice (RSP10997)
  10. 0.234 Liberty Haze (RSP11000)
  11. 0.235 RKM-2018-032 (RSP11124)
  12. 0.235 Durban Poison (RSP11014)
  13. 0.237 RKM-2018-033 (RSP11125)
  14. 0.238 Recon (RSP10755)
  15. 0.238 Gold Cracker (RSP11048)
  16. 0.241 RKM-2018-020 (RSP11112)
  17. 0.257 RKM-2018-029 (RSP11121)
  18. 0.257 RKM-2018-009 (RSP11100)
  19. 0.261 Cbot-2019-006 (RSP11134)
  20. 0.271 Skunk 18 (RSP11038)

Most genetically distant strains (All Samples)

0 0.117 0.233 0.350 0.467
clone distance sibling distance more distant
  1. 0.451 Cherry Blossom (RSP11318)
  2. 0.447 Cherry Blossom (RSP11323)
  3. 0.428 Cherry Blossom (RSP11328)
  4. 0.427 Unknown- Cherry Wine - 001 (RSP11268)
  5. 0.418 Cherry Blossom (RSP11301)
  6. 0.408 Cherry Blossom (RSP11311)
  7. 0.402 Cherry Blossom (RSP11306)
  8. 0.401 Wife (RSP11148)
  9. 0.401 Cherry Blossom (RSP11325)
  10. 0.398 Unknown- Cherry Wine - 002 (RSP11269)
  11. 0.396 Cherry Blossom (RSP11300)
  12. 0.396 Cherry Blossom (RSP11298)
  13. 0.395 Cherry Blossom (RSP11312)
  14. 0.391 Cherry Blossom (RSP11309)
  15. 0.389 Unknown- Cherry Wine - 003 (RSP11270)
  16. 0.386 Cherry Blossom (RSP11334)
  17. 0.383 Cherry Blossom (RSP11315)
  18. 0.383 Avidekel (RSP10938)
  19. 0.380 Cherry Blossom (RSP11327)
  20. 0.376 Cherry Blossom (RSP11331)

Most genetically distant strains (Base Tree)

0 0.092 0.183 0.275 0.367
clone distance sibling distance more distant
  1. 0.356 Cbot-2019-005 (RSP11133)
  2. 0.347 Cherry (RSP11143)
  3. 0.339 Cbot-2019-001 (RSP11129)
  4. 0.332 JL yellow (RSP11075)
  5. 0.325 Carmagnola (RSP11037)
  6. 0.323 Feral (RSP10890)
  7. 0.320 RKM-2018-028 (RSP11120)
  8. 0.319 RKM-2018-018 (RSP11110)
  9. 0.318 Cbot-2019-004 (RSP11132)
  10. 0.316 Lovrin (RSP10658)
  11. 0.314 Cherry (RSP11142)
  12. 0.312 Ivory (RSP10668)
  13. 0.308 Black Beauty (RSP11035)
  14. 0.308 Blueberry Cheesecake (RSP10672)
  15. 0.307 Santhica27 (RSP11047)
  16. 0.307 Futura 75 (RSP10664)
  17. 0.306 Carmagnola (RSP10979)
  18. 0.303 Fedora 17 (RSP10661)
  19. 0.302 UP Sunrise (RSP10989)
  20. 0.302 Monoica (RSP10241)

Nearest genetic relative in Phylos dataset

Phylos Strain SRR8347233
Overlapping SNPs:
106
Concordance:
75

Nearest genetic relative in Lynch dataset

Lynch Strain SRR3495251
Overlapping SNPs:
7
Concordance:
7

Blockchain Registration Information

Transaction ID
2eb489ec1d65d884709b1410d028719835b0734e8460b174db18cb1f54b8e96a
Stamping Certificate
Download PDF (849.3 KB)
SHASUM Hash
cade0ea3740ad55ba25e09ae83af46e7162c6b008cbc1fa6c8db3507151ed581
QR code for RSP11071

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