Unknown-(Cherry Wine)-(002)

RSP11269
StrainSEEK Cannabis Certification Report

Accession Date:

September 27, 2019

General Information

Strain: Unknown-(Cherry Wine)-(002)
Sample: Big Bud-002
RSP ID: RSP11269
Grower: Keaton Baker
Accession Date: September 27, 2019
Gender: Female
Strain Seek Version: V2


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Chemical Information*


Cannabinoid and Terpenoid information provided by our Partner Labs.

CANNABINOIDS

THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A

TERPENOIDS

  • α-Bisabolol %: N/A
    Borneol %: N/A
    Camphene %: N/A
    Carene %: N/A
    Caryophyllene oxide %: N/A
    β-Carophyllene %: N/A
    Fenchol %: N/A
    Geraniol %: N/A
    α-Humulene %: N/A
    Limonene %: N/A
    Linalool %: N/A
  • Myrcene %: N/A
    α-Phellandrene %: N/A
    Terpinolene %: N/A
    α-Terpineol %: N/A
    α-Terpinene %: N/A
    γ-Terpinene %: N/A
    Total Nerolidol %: N/A
    Total Ocimene %: N/A
    α-Pinene %: N/A
    β-Pinene %: N/A

Genetic Information

View this strain on the Phylotree
Percent Heterozygosity: 1.51
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type III

Bt/Bd ALLELE COVERAGE

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CBCAS COVERAGE


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Y-RATIO DISTRIBUTION


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VARIANTS (THCAS, CBDAS, and CBCAS)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
CBDASc.8G>Ap.Cys3Tyrmissense variantMODERATEcontig17722082234

IGV:Start|Jump

G/A

NGS:0.057

C90:0.000

0.057
CBDASc.221C>Gp.Thr74Sermissense variantMODERATEcontig17722082447

IGV:Start|Jump

C/G

NGS:0.136

C90:0.057

0.136
CBDASc.1420A>Cp.Lys474Glnmissense variantMODERATEcontig17722083646

IGV:Start|Jump

A/C

NGS:0.132

C90:0.813

0.132



VARIANTS (SELECT GENES OF INTEREST)

Gene HGVS.c HGVS.p Annotation Annotation Impact Contig Contig Pos Ref/Alt Var Freq
GPPs1

UNIPROT

c.845_848delAAAGp.Glu282fsframeshift variantHIGHcontig676169629

IGV:Start|Jump

TGAAA/T

NGS:0.118

C90:0.000

0.118
PKSG-4a

UNIPROT

c.493G>Ap.Gly165Sermissense variantMODERATEcontig7001937904

IGV:Start|Jump

G/A

NGS:0.103

C90:0.000

0.103
PKSG-4a

UNIPROT

c.1191_1193delTTAp.Tyr398deldisruptive inframe deletionMODERATEcontig7001938600

IGV:Start|Jump

AATT/A

NGS:0.167

C90:0.000

0.167
PKSG-2a

UNIPROT

c.67T>Ap.Phe23Ilemissense variantMODERATEcontig7001945567

IGV:Start|Jump

A/T

NGS:0.825

C90:0.904

0.825
PKSG-2a

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001945603

IGV:Start|Jump

T/A

NGS:0.763

C90:0.876

0.763
PKSG-2b

UNIPROT

c.1152T>Ap.Asn384Lysmissense variantMODERATEcontig7001950486

IGV:Start|Jump

A/T

NGS:0.715

C90:0.895

0.715
PKSG-2b

UNIPROT

c.1132C>Gp.Leu378Valmissense variantMODERATEcontig7001950506

IGV:Start|Jump

G/C

NGS:0.717

C90:0.000

0.717
PKSG-2b

UNIPROT

c.1117A>Gp.Ile373Valmissense variantMODERATEcontig7001950521

IGV:Start|Jump

T/C

NGS:0.807

C90:0.981

0.807
PKSG-2b

UNIPROT

c.774G>Ap.Met258Ilemissense variantMODERATEcontig7001950864

IGV:Start|Jump

C/T

NGS:0.366

C90:0.947

0.366
PKSG-2b

UNIPROT

c.241G>Ap.Val81Metmissense variantMODERATEcontig7001951397

IGV:Start|Jump

C/T

NGS:0.154

C90:0.000

0.154
PKSG-2b

UNIPROT

c.240T>Gp.Asp80Glumissense variantMODERATEcontig7001951398

IGV:Start|Jump

A/C

NGS:0.156

C90:0.000

0.156
PKSG-2b

UNIPROT

c.230T>Cp.Val77Alamissense variantMODERATEcontig7001951408

IGV:Start|Jump

A/G

NGS:0.134

C90:0.646

0.134
PKSG-2b

UNIPROT

c.224A>Gp.Lys75Argmissense variantMODERATEcontig7001951414

IGV:Start|Jump

T/C

NGS:0.151

C90:0.957

0.151
PKSG-2b

UNIPROT

c.31A>Tp.Thr11Sermissense variantMODERATEcontig7001951851

IGV:Start|Jump

T/A

NGS:0.844

C90:0.880

0.844
PKSG-4b

UNIPROT

c.496A>Gp.Lys166Glumissense variantMODERATEcontig7002721177

IGV:Start|Jump

T/C

NGS:0.651

C90:0.684

0.651
PKSG-4b

UNIPROT

c.489delTp.Phe163fsframeshift variantHIGHcontig7002721183

IGV:Start|Jump

CA/C

NGS:0.792

C90:0.761

0.792
PKSG-4b

UNIPROT

c.485A>Gp.Lys162Argmissense variantMODERATEcontig7002721188

IGV:Start|Jump

T/C

NGS:0.643

C90:0.301

0.643
PKSG-4b

UNIPROT

c.352_355delACAGp.Thr118fsframeshift variantHIGHcontig7002721317

IGV:Start|Jump

CCTGT/C

NGS:0.529

C90:0.000

0.529
PKSG-4b

UNIPROT

c.324A>Cp.Glu108Aspmissense variantMODERATEcontig7002721349

IGV:Start|Jump

T/G

NGS:0.094

C90:0.000

0.094
PKSG-4b

UNIPROT

c.323A>Gp.Glu108Glymissense variantMODERATEcontig7002721350

IGV:Start|Jump

T/C

NGS:0.469

C90:0.000

0.469
DXR-2

UNIPROT

c.1319T>Cp.Ile440Thrmissense variantMODERATEcontig380285250

IGV:Start|Jump

A/G

NGS:0.480

C90:0.000

0.48
HDS-2

UNIPROT

c.82_93delGTAACCGGAACTp.Val28_Thr31delconservative inframe deletionMODERATEcontig951989748

IGV:Start|Jump

CGTAACCGGAACT/C

NGS:0.805

C90:0.000

0.805
HDS-2

UNIPROT

c.127T>Gp.Ser43Alamissense variantMODERATEcontig951989794

IGV:Start|Jump

T/G

NGS:0.721

C90:0.000

0.721


NEAREST GENETIC RELATIVES TO Unknown-(Cherry Wine)-(002):
# Relative Genetic Distance
1 RSP11270-Unknown- Cherry Wine - 003 3.35
2 RSP11320-Cherry Blossom 4.33
3 RSP11268-Unknown- Cherry Wine - 001 4.72
4 RSP11321-Cherry Blossom 5.12
5 RSP11309-Cherry Blossom 5.6
6 RSP11298-Cherry Blossom 5.61
7 RSP11271-Unknown- Cherry Wine - 004 5.7
8 RSP11316-Cherry Blossom 5.98
9 RSP11308-Cherry Blossom 6.16
10 RSP11335-Cherry Blossom 6.19
11 RSP11274-Cherry Blossom 6.29
12 RSP11332-Cherry Blossom 6.47
13 RSP11272-Unknown- Cherry Wine - 005 6.48
14 RSP11310-Cherry Blossom 6.5
15 RSP11311-Cherry Blossom 6.9
16 RSP11312-Cherry Blossom 7.22
17 RSP11300-Cherry Blossom 7.26
18 RSP11334-Cherry Blossom 7.56
19 RSP11301-Cherry Blossom 7.75
20 RSP11304-Cherry Blossom 7.98
NEAREST GENETIC RELATIVES TO BASE TREE:
# Relative Genetic Distance
1 RSP11143-Cherry 9.36
2 RSP11014-Durban Poison 9.78
3 RSP10989-UP Sunrise 9.88
4 RSP10672-Blueberry Cheesecake 10.09
5 RSP11142-Cherry 10.14
6 RSP11132-Cbot-2019-004 10.19
7 RSP10684-Blueberry Cheesecake 10.22
8 RSP11000-Liberty Haze 10.44
9 RSP10105-QUEEN JESUS 10.63
10 RSP11094-RKM-2018-003 10.99
11 RSP11002-CST 11.04
12 RSP11111-RKM-2018-019 11.58
13 RSP11115-RKM-2018-023 11.69
14 RSP11050-Hermaphrodite ResearchSample2 11.69
15 RSP10667-Tygra 11.7
16 RSP10653-Jiangji 11.76
17 RSP11044-Tisza 11.8
18 RSP11120-RKM-2018-028 11.82
19 RSP10680-Blueberry Cheesecake 11.84
20 RSP11096-RKM-2018-005 11.87
MOST GENETICALLY DISTANT STRAINS FROM Unknown-(Cherry Wine)-(002):
# Strain Genetic Distance
1 RSP11190-Red Eye OG 14.78
2 RSP11118-RKM-2018-026 14.31
3 RSP11266-Abacus 14.24
4 RSP11341-Garlic 14.19
5 RSP11104-RKM-2018-013 14.08
6 RSP11353-Rugburn OG 14.07
7 RSP10837-Skywalker OG 14.07
8 RSP11072-SFVxTK 14.02
9 RSP11185-Chem 91 13.78
10 RSP11241-501st OG 13.77
11 RSP11213-80E 13.65
12 RSP11075-JL yellow 13.58
13 RSP11093-RKM-2018-002 13.53
14 RSP11128-Kush Hemp E1 13.52
15 RSP11214-JL 3rd Gen Mother 13.51
16 RSP11199-JL 4th Gen 5 13.5
17 RSP11347-Jacks Cleaner 13.5
18 RSP11042-Hermaphrodite Research Sample1 13.48
19 RSP11211-80E 13.46
20 RSP11208-CS 13.41
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain Number of Overlapping SNPs Concordance
SRR8347252 70 43

Blockchain Registration Information:

Transaction ID: 2196457af1b35a8c66c5de6a537ffa8dd2403be7e75918e874f1caa5979cb0e7
Stamping Certificate: PDF
SHASUM Hash: e5d8698c5089492a0f4c00befc91d971c064fb8ae2a0bd46249bde284d795a4f