General Information
Chemical Information*
Cannabinoid and Terpenoid information provided by our Partner Labs.
CANNABINOIDS
THC + THCA %: N/A
CBD + CBDA %: N/A
THCV + THCVA %: N/A
CBC + CBCA %: N/A
CBG + CBGA %: N/A
CBN + CBNA %: N/A
TERPENOIDS
- α-Bisabolol %: N/A
Borneol %: N/A
Camphene %: N/A
Carene %: N/A
Caryophyllene oxide %: N/A
β-Carophyllene %: N/A
Fenchol %: N/A
Geraniol %: N/A
α-Humulene %: N/A
Limonene %: N/A
Linalool %: N/A
-
Myrcene %: N/A
α-Phellandrene %: N/A
Terpinolene %: N/A
α-Terpineol %: N/A
α-Terpinene %: N/A
γ-Terpinene %: N/A
Total Nerolidol %: N/A
Total Ocimene %: N/A
α-Pinene %: N/A
β-Pinene %: N/A
Genetic Information
View this strain on the Phylotree
Percent Heterozygosity: 1.1
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I
Percent Heterozygosity: 1.1
Download VCF file: Here
Download FastQ Files: Read 1 Read 2
Download BAM file: BAM index
Download Annotated Variants: ANNOTATED VCF index
Plant Type: Type I
CBCAS COVERAGE ![]() What does this visualization mean? |
Y-RATIO DISTRIBUTION ![]() What does this visualization mean? |
VARIANTS (THCAS, CBDAS, and CBCAS)
Gene | HGVS.c | HGVS.p | Annotation | Annotation Impact | Contig | Contig Pos | Ref/Alt | Var Freq | |
---|---|---|---|---|---|---|---|---|---|
THCAS | c.1347G>C | p.Trp449Cys | missense variant | MODERATE | contig741 | 4416481 | C/G | NGS:0.002 C90:0.000 | 0.002 |
THCAS | c.976G>A | p.Asp326Asn | missense variant | MODERATE | contig741 | 4416852 | C/T | NGS:0.002 C90:0.000 | 0.002 |
NEAREST GENETIC RELATIVES TO KYRG-21:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11052-KYRG-151 | 5.87 | 2 | RSP11054-Kyrgyz Gold | 6.13 | 3 | RSP11051-KYRG-11 | 6.39 | 4 | RSP10659-Tisza | 6.44 | 5 | RSP10661-Fedora 17 | 6.5 | 6 | RSP10981-USO 31 | 6.53 | 7 | RSP10658-Lovrin | 6.57 | 8 | RSP11045-Tisza | 6.7 | 9 | RSP11044-Tisza | 6.83 | 10 | RSP10653-Jiangji | 6.84 | 11 | RSP10056-Santhica27 | 6.86 | 12 | RSP10233-USO31 | 6.88 | 13 | RSP10983-USO 31 | 6.9 | 14 | RSP10890-Feral | 7 | 15 | RSP11039-Carmagnola | 7.04 | 16 | RSP10891-Feral | 7.06 | 17 | RSP10667-Tygra | 7.09 | 18 | RSP10235-Diana | 7.1 | 19 | RSP10664-Futura 75 | 7.1 | 20 | RSP10241-Monoica | 7.19 |
NEAREST GENETIC RELATIVES TO BASE TREE:
# | Relative | Genetic Distance |
---|---|---|
1 | RSP11054-Kyrgyz Gold | 6.48 | 2 | RSP10658-Lovrin | 6.57 | 3 | RSP10661-Fedora 17 | 6.64 | 4 | RSP11051-KYRG-11 | 6.65 | 5 | RSP10659-Tisza | 6.69 | 6 | RSP10981-USO 31 | 6.7 | 7 | RSP11044-Tisza | 6.93 | 8 | RSP10653-Jiangji | 7.01 | 9 | RSP10890-Feral | 7.06 | 10 | RSP10667-Tygra | 7.16 | 11 | RSP10241-Monoica | 7.23 | 12 | RSP10664-Futura 75 | 7.31 | 13 | RSP11047-Santhica27 | 7.49 | 14 | RSP11037-Carmagnola | 7.57 | 15 | RSP10668-Ivory | 7.91 | 16 | RSP10979-Carmagnola | 7.94 | 17 | RSP10755-Recon | 8.27 | 18 | RSP10997-Kimbo Slice | 8.54 | 19 | RSP11073-Pie Hoe | 8.8 | 20 | RSP11121-RKM-2018-029 | 8.85 |
MOST GENETICALLY DISTANT STRAINS FROM KYRG-21:
# | Strain | Genetic Distance |
---|---|---|
1 | RSP11318-Cherry Blossom | 13.74 | 2 | RSP11300-Cherry Blossom | 13.59 | 3 | RSP11312-Cherry Blossom | 13.15 | 4 | RSP11323-Cherry Blossom | 13.07 | 5 | RSP11268-Unknown- Cherry Wine - 001 | 12.94 | 6 | RSP11328-Cherry Blossom | 12.92 | 7 | RSP11311-Cherry Blossom | 12.91 | 8 | RSP11269-Unknown- Cherry Wine - 002 | 12.89 | 9 | RSP11301-Cherry Blossom | 12.82 | 10 | RSP11298-Cherry Blossom | 12.53 | 11 | RSP11325-Cherry Blossom | 12.45 | 12 | RSP11274-Cherry Blossom | 12.34 | 13 | RSP11331-Cherry Blossom | 12.31 | 14 | RSP11310-Cherry Blossom | 12.28 | 15 | RSP11332-Cherry Blossom | 12.26 | 16 | RSP11270-Unknown- Cherry Wine - 003 | 12.24 | 17 | RSP11334-Cherry Blossom | 12.21 | 18 | RSP11316-Cherry Blossom | 12.17 | 19 | RSP11302-Cherry Blossom | 12.16 | 20 | RSP11308-Cherry Blossom | 12.14 |
NEAREST GENETIC RELATIVES IN PHYLOS DATASET:
Phylos Strain | Number of Overlapping SNPs | Concordance |
---|---|---|
SRR4448773 | 109 | 72 |
Blockchain Registration Information:
Transaction ID: b5dd0a815d6a94de1189f99e8b294715fd141a6c6c820986e2c42f13b45c5402
Stamping Certificate: PDF
SHASUM Hash: 88a0a2e6579d087b1a5b054401aa7c9994d6b67b25da09bf9adf9eb2b3e7d9c6
Stamping Certificate: PDF
SHASUM Hash: 88a0a2e6579d087b1a5b054401aa7c9994d6b67b25da09bf9adf9eb2b3e7d9c6